Click here to switch to the map view.

The map label for this gene is scpA [H]

Identifier: 145295556

GI number: 145295556

Start: 1644113

End: 1645078

Strand: Direct

Name: scpA [H]

Synonym: cgR_1483

Alternate gene names: 145295556

Gene position: 1644113-1645078 (Clockwise)

Preceding gene: 145295555

Following gene: 145295558

Centisome position: 49.61

GC content: 50.93

Gene sequence:

>966_bases
ATGACAAAAGTAGCGGAGCTGGACCAAGAGTGGTCCGAAGTAGATGACGCGGAATTAGACGCGCAAAGCGCTGGCACTTC
TGATAGTTCCAGCACAGACGACTTCGCTGACGCAGAAAACACTTCTGAAAATCTGGGACCCATCGGCCCAGAACCACTCC
CTGAACCAGATGGGGATGTTCCGATATCGGGTTTCCAAGTGCAGCTCGATAATTTTGAAGGTCCTTTTGACCTTCTCCTG
CAGCTGATTACCAAGAAGAAACTTGATGTCACTGAAGTTGCCTTGGCCCAGGTGACCGACGAGTTTATTGCTTACACCCG
AAAACTGGGCGAAACCAGCGATTTGGATGAGACCACAGAGTTCTTAGTGGTGGCCGCAACGCTGTTGGATCTTAAAACAG
CTCGCCTGCTCCCGCGTGGTGAAGTCGACGATGAAGATGATCTCGAATTGCTCGAAGTAAAGGATCTCCTTTTTGCCAGG
TTGTTGCAGTATCGCGCTTACAAGCAAGTTGCGGAAATGTTTGCGCAATGGCAGCGAGATGCTCGACGCAGGTACCCGCG
CGCTGTCTCATTAGAAACTCAGTTTGCCAACCTCTTGCCGCCCGTTTCCTTGGGTCATTCCTTAAAAAGTTTCAGCGAGT
TGGCTGCTGTGGTGTTTCGTCCGAAACCCCCAGAGACGGTAAAAACAGATCACGTGCACCAAGTTGCGGTGTCAGTTCCA
GAGCAAGCAGGCAGAATTCTTAACACATTGAAGCTTGCCGGAATCGATCATTATTTGAGCTTTCAGCTGCTCACACGTGA
TTGTACCGCGTCAATGGAAGTGATTGGCCGCTTCCTTGCCTTGCTGGAATTGTATAAGGCACGCGCTATTGAAACCTTGC
AAGAGGAGCCACTCGGCGAGCTTAAAGTTTCGTGGACTGGCATTGATGTCGATCCAGCAGTCGTCGCGGCGAGTGACTGG
GAGTAA

Upstream 100 bases:

>100_bases
CCGCGTCAACGACTAGGTTGATTTTCTAAAAACCACGCCTCCTTCTGCGGGCCTGTCAGTAGCTGTTATTGCAGGTTCAT
GCGTTAAGGTGTGGAAGACC

Downstream 100 bases:

>100_bases
TCAGTTTTTCTTAAGGAAACGTTGCTGAATTAGTTTTAGTGACCTAAGCTACAAGAGCTGGTTTGCTGAAAAATGAATGA
CCTCGCAGTTTAACTGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTKVAELDQEWSEVDDAELDAQSAGTSDSSSTDDFADAENTSENLGPIGPEPLPEPDGDVPISGFQVQLDNFEGPFDLLL
QLITKKKLDVTEVALAQVTDEFIAYTRKLGETSDLDETTEFLVVAATLLDLKTARLLPRGEVDDEDDLELLEVKDLLFAR
LLQYRAYKQVAEMFAQWQRDARRRYPRAVSLETQFANLLPPVSLGHSLKSFSELAAVVFRPKPPETVKTDHVHQVAVSVP
EQAGRILNTLKLAGIDHYLSFQLLTRDCTASMEVIGRFLALLELYKARAIETLQEEPLGELKVSWTGIDVDPAVVAASDW
E

Sequences:

>Translated_321_residues
MTKVAELDQEWSEVDDAELDAQSAGTSDSSSTDDFADAENTSENLGPIGPEPLPEPDGDVPISGFQVQLDNFEGPFDLLL
QLITKKKLDVTEVALAQVTDEFIAYTRKLGETSDLDETTEFLVVAATLLDLKTARLLPRGEVDDEDDLELLEVKDLLFAR
LLQYRAYKQVAEMFAQWQRDARRRYPRAVSLETQFANLLPPVSLGHSLKSFSELAAVVFRPKPPETVKTDHVHQVAVSVP
EQAGRILNTLKLAGIDHYLSFQLLTRDCTASMEVIGRFLALLELYKARAIETLQEEPLGELKVSWTGIDVDPAVVAASDW
E
>Mature_320_residues
TKVAELDQEWSEVDDAELDAQSAGTSDSSSTDDFADAENTSENLGPIGPEPLPEPDGDVPISGFQVQLDNFEGPFDLLLQ
LITKKKLDVTEVALAQVTDEFIAYTRKLGETSDLDETTEFLVVAATLLDLKTARLLPRGEVDDEDDLELLEVKDLLFARL
LQYRAYKQVAEMFAQWQRDARRRYPRAVSLETQFANLLPPVSLGHSLKSFSELAAVVFRPKPPETVKTDHVHQVAVSVPE
QAGRILNTLKLAGIDHYLSFQLLTRDCTASMEVIGRFLALLELYKARAIETLQEEPLGELKVSWTGIDVDPAVVAASDWE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 35660; Mature: 35529

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVAELDQEWSEVDDAELDAQSAGTSDSSSTDDFADAENTSENLGPIGPEPLPEPDGDV
CCCHHHHHHHHHHCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PISGFQVQLDNFEGPFDLLLQLITKKKLDVTEVALAQVTDEFIAYTRKLGETSDLDETTE
CCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FLVVAATLLDLKTARLLPRGEVDDEDDLELLEVKDLLFARLLQYRAYKQVAEMFAQWQRD
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRRYPRAVSLETQFANLLPPVSLGHSLKSFSELAAVVFRPKPPETVKTDHVHQVAVSVP
HHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
EQAGRILNTLKLAGIDHYLSFQLLTRDCTASMEVIGRFLALLELYKARAIETLQEEPLGE
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LKVSWTGIDVDPAVVAASDWE
EEEEEECCCCCCCEEECCCCC
>Mature Secondary Structure 
TKVAELDQEWSEVDDAELDAQSAGTSDSSSTDDFADAENTSENLGPIGPEPLPEPDGDV
CCHHHHHHHHHHCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PISGFQVQLDNFEGPFDLLLQLITKKKLDVTEVALAQVTDEFIAYTRKLGETSDLDETTE
CCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FLVVAATLLDLKTARLLPRGEVDDEDDLELLEVKDLLFARLLQYRAYKQVAEMFAQWQRD
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARRRYPRAVSLETQFANLLPPVSLGHSLKSFSELAAVVFRPKPPETVKTDHVHQVAVSVP
HHHHCCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
EQAGRILNTLKLAGIDHYLSFQLLTRDCTASMEVIGRFLALLELYKARAIETLQEEPLGE
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LKVSWTGIDVDPAVVAASDWE
EEEEEECCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA