Click here to switch to the map view.

The map label for this gene is sopA [C]

Identifier: 145295555

GI number: 145295555

Start: 1643156

End: 1644028

Strand: Direct

Name: sopA [C]

Synonym: cgR_1482

Alternate gene names: 145295555

Gene position: 1643156-1644028 (Clockwise)

Preceding gene: 145295553

Following gene: 145295556

Centisome position: 49.58

GC content: 53.04

Gene sequence:

>873_bases
GTGAGTGATGCAGGGAAGAAGGACTCTTCCAAGGTGGAGATCGGACTGACCGGTCGACCCCTGCGCGAGTTGCCTGAGCC
ATCTCCTTTGGAAAAACATGGCCCAGCAACGATCATTGCCATGGCGAATCAAAAAGGTGGCGTTGGTAAAACCACGTCCA
CCATCAACCTCGGAGCATGCCTTGCAGAGGCGGGACGTAAAGTCCTGCTCGTTGACTTGGATCCGCAAGGTGCGTTGACT
GCTGGTTTGGGAATCCACTACGACGACGTGGATATCACCGTGTATGACCTCATGGTGGACAACAATTCCACCATTGATCA
GGCGATCCACCACACTGGTGTTCCTGATCTGGATGTCGTTCCTGCAAATATTGACTTGTCTGCTGCAGAAATTCAGCTGG
TCAATGAAGTTGGTCGTGAACAAACACTTGCCAGGGCGCTGCGTCCTGTCATGAAGGACTACGACTTCATCATCCTTGAT
TGTCAGCCATCACTTGGTCTTTTGACGGTGAACGCTTTGGCGTGCGCGCACGGGGTTATCATCCCGATGGAGTGCGAGTA
CTTCTCACTGCGTGGCCTCGCATTGCTCACTGACACCGTGGAAAAAGTTGCCGATCGGTTGAACTTCGATCTGGAAATCC
TCGGCATTTTGGTCACTATGTTTGACCGACGCACCTCTCACGCCAGGGAAGTGATGTCACGAGTTGTTGAGGTTTTCGAT
GAGAAAGTGTTCGATACGGTAATCACCCGAACCGTTAGGTTCCCCGAAACCTCTGTTGCCGGTGAGCCGATCATCACATG
GGCACCAACATCACAAGGTGCGGAGCAGTACCGTTCCTTGGCGCGTGAAGTGATCAGCCGCGTCAACGACTAG

Upstream 100 bases:

>100_bases
GTCGAGAGCTGTAAAGTCAAGGCTATATACTTCTCAAGTCGCGCCGAAATTTGTTAAATGACTATAAAAGGCAGTCCTAG
TCAAGGAAGAAGGTTTGACT

Downstream 100 bases:

>100_bases
GTTGATTTTCTAAAAACCACGCCTCCTTCTGCGGGCCTGTCAGTAGCTGTTATTGCAGGTTCATGCGTTAAGGTGTGGAA
GACCATGACAAAAGTAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSDAGKKDSSKVEIGLTGRPLRELPEPSPLEKHGPATIIAMANQKGGVGKTTSTINLGACLAEAGRKVLLVDLDPQGALT
AGLGIHYDDVDITVYDLMVDNNSTIDQAIHHTGVPDLDVVPANIDLSAAEIQLVNEVGREQTLARALRPVMKDYDFIILD
CQPSLGLLTVNALACAHGVIIPMECEYFSLRGLALLTDTVEKVADRLNFDLEILGILVTMFDRRTSHAREVMSRVVEVFD
EKVFDTVITRTVRFPETSVAGEPIITWAPTSQGAEQYRSLAREVISRVND

Sequences:

>Translated_290_residues
MSDAGKKDSSKVEIGLTGRPLRELPEPSPLEKHGPATIIAMANQKGGVGKTTSTINLGACLAEAGRKVLLVDLDPQGALT
AGLGIHYDDVDITVYDLMVDNNSTIDQAIHHTGVPDLDVVPANIDLSAAEIQLVNEVGREQTLARALRPVMKDYDFIILD
CQPSLGLLTVNALACAHGVIIPMECEYFSLRGLALLTDTVEKVADRLNFDLEILGILVTMFDRRTSHAREVMSRVVEVFD
EKVFDTVITRTVRFPETSVAGEPIITWAPTSQGAEQYRSLAREVISRVND
>Mature_289_residues
SDAGKKDSSKVEIGLTGRPLRELPEPSPLEKHGPATIIAMANQKGGVGKTTSTINLGACLAEAGRKVLLVDLDPQGALTA
GLGIHYDDVDITVYDLMVDNNSTIDQAIHHTGVPDLDVVPANIDLSAAEIQLVNEVGREQTLARALRPVMKDYDFIILDC
QPSLGLLTVNALACAHGVIIPMECEYFSLRGLALLTDTVEKVADRLNFDLEILGILVTMFDRRTSHAREVMSRVVEVFDE
KVFDTVITRTVRFPETSVAGEPIITWAPTSQGAEQYRSLAREVISRVND

Specific function: May play a role in septum formation [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 31548; Mature: 31416

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAGKKDSSKVEIGLTGRPLRELPEPSPLEKHGPATIIAMANQKGGVGKTTSTINLGAC
CCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHHH
LAEAGRKVLLVDLDPQGALTAGLGIHYDDVDITVYDLMVDNNSTIDQAIHHTGVPDLDVV
HHHCCCEEEEEEECCCCCEEECCCEEECCCCEEEEEEEECCCCHHHHHHHHCCCCCCCEE
PANIDLSAAEIQLVNEVGREQTLARALRPVMKDYDFIILDCQPSLGLLTVNALACAHGVI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHHHHHHCCCE
IPMECEYFSLRGLALLTDTVEKVADRLNFDLEILGILVTMFDRRTSHAREVMSRVVEVFD
EEEECCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
EKVFDTVITRTVRFPETSVAGEPIITWAPTSQGAEQYRSLAREVISRVND
HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDAGKKDSSKVEIGLTGRPLRELPEPSPLEKHGPATIIAMANQKGGVGKTTSTINLGAC
CCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHHH
LAEAGRKVLLVDLDPQGALTAGLGIHYDDVDITVYDLMVDNNSTIDQAIHHTGVPDLDVV
HHHCCCEEEEEEECCCCCEEECCCEEECCCCEEEEEEEECCCCHHHHHHHHCCCCCCCEE
PANIDLSAAEIQLVNEVGREQTLARALRPVMKDYDFIILDCQPSLGLLTVNALACAHGVI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHHHHHHCCCE
IPMECEYFSLRGLALLTDTVEKVADRLNFDLEILGILVTMFDRRTSHAREVMSRVVEVFD
EEEECCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
EKVFDTVITRTVRFPETSVAGEPIITWAPTSQGAEQYRSLAREVISRVND
HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]