Click here to switch to the map view.

The map label for this gene is 145295001

Identifier: 145295001

GI number: 145295001

Start: 1046257

End: 1046538

Strand: Direct

Name: 145295001

Synonym: cgR_0946

Alternate gene names: NA

Gene position: 1046257-1046538 (Clockwise)

Preceding gene: 145294999

Following gene: 145295002

Centisome position: 31.57

GC content: 48.94

Gene sequence:

>282_bases
ATGCAGGCGAGCCCAGAATTTGGAGAGCTCCGCAGCAAGTTCCGTTCCTTTGCTTTCCCAATGACTGTTGCCTTCTTCTT
GTGGTACGTCGTCTACGTTTTGGTTGCATCCTTTGCGTCAGAGTGGATGGCAACCCCAGTTTTCGGCGCAATCAACATCG
GCCTAATCTTCGGCTTCCTTCAGTTCGTAACCACATTCATCATTACTTACATCTACGTCATGTTTGCGAACAAGAACTTG
GAGCCTCGTCAGGCTGCTATTCGCCAGAAGATGGAAGGTTAA

Upstream 100 bases:

>100_bases
GACTCCCGCTCGAGGGATATGAAAGCGAGATAAGTTTCCAGTGAATGCAGAACAAATCACCCAGGGGCGTCGCCAGCCGA
CGGCTCAAGAGTTTCGGGAC

Downstream 100 bases:

>100_bases
TCAGATATGAATTCCACTATTCTCCTTGCACAAGACGCTGTTTCTGAGGGCGTCGGTAATCCGATTCTTAACATCAGTGT
CTTTGTCGTCTTCATTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: Clumping Factor B

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MQASPEFGELRSKFRSFAFPMTVAFFLWYVVYVLVASFASEWMATPVFGAINIGLIFGFLQFVTTFIITYIYVMFANKNL
EPRQAAIRQKMEG

Sequences:

>Translated_93_residues
MQASPEFGELRSKFRSFAFPMTVAFFLWYVVYVLVASFASEWMATPVFGAINIGLIFGFLQFVTTFIITYIYVMFANKNL
EPRQAAIRQKMEG
>Mature_93_residues
MQASPEFGELRSKFRSFAFPMTVAFFLWYVVYVLVASFASEWMATPVFGAINIGLIFGFLQFVTTFIITYIYVMFANKNL
EPRQAAIRQKMEG

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10712; Mature: 10712

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASPEFGELRSKFRSFAFPMTVAFFLWYVVYVLVASFASEWMATPVFGAINIGLIFGFL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFVTTFIITYIYVMFANKNLEPRQAAIRQKMEG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MQASPEFGELRSKFRSFAFPMTVAFFLWYVVYVLVASFASEWMATPVFGAINIGLIFGFL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFVTTFIITYIYVMFANKNLEPRQAAIRQKMEG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA