| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is fklB [C]
Identifier: 145294999
GI number: 145294999
Start: 1043826
End: 1044182
Strand: Direct
Name: fklB [C]
Synonym: cgR_0944
Alternate gene names: 145294999
Gene position: 1043826-1044182 (Clockwise)
Preceding gene: 145294998
Following gene: 145295001
Centisome position: 31.5
GC content: 57.42
Gene sequence:
>357_bases ATGGAAAAGCCACAGATTGAGCTACCGGTCGGTCCAGCACCGGAAGATCTCGTAATCTCTGACATCATCGTTGGCGAAGG CGCAGAAGCCCGCCCAGGCGGAGAAGTTGAGGTCCACTACGTGGGCGTTGACTTTGAAACCGGCGAGGAGTTTGACTCTT CCTGGGATCGTGGACAGACCAGCCAGTTCCCACTCAACGGCCTCATTGCAGGTTGGCAAGAGGGAATTCCAGGCATGAAG GTCGGCGGACGTCGTCAGCTGACCATTCCACCAGAGGCTGCTTACGGCCCTGAGGGTTCCGGCCACCCACTGTCTGGCCG TACCCTGGTGTTCATTATCGATTTGATCAGCGCATAG
Upstream 100 bases:
>100_bases CTTCGGCCGAAGCCACTTCGTCTGTCATAATGACAGGGATGGTTTCGGCCGTTTTTGCATGAAACCAAAAAATACGATTT TCAAGGAGCATGTACAGCAC
Downstream 100 bases:
>100_bases TTTTCTTTACTGCGCTAGGCGCTCAAATCGTGTGAAGCGACTGTCGCGTCCCGCCCTCTCCGGATTGTTATCTAATTCGG AGAGGGCGTTGCTGATTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MEKPQIELPVGPAPEDLVISDIIVGEGAEARPGGEVEVHYVGVDFETGEEFDSSWDRGQTSQFPLNGLIAGWQEGIPGMK VGGRRQLTIPPEAAYGPEGSGHPLSGRTLVFIIDLISA
Sequences:
>Translated_118_residues MEKPQIELPVGPAPEDLVISDIIVGEGAEARPGGEVEVHYVGVDFETGEEFDSSWDRGQTSQFPLNGLIAGWQEGIPGMK VGGRRQLTIPPEAAYGPEGSGHPLSGRTLVFIIDLISA >Mature_118_residues MEKPQIELPVGPAPEDLVISDIIVGEGAEARPGGEVEVHYVGVDFETGEEFDSSWDRGQTSQFPLNGLIAGWQEGIPGMK VGGRRQLTIPPEAAYGPEGSGHPLSGRTLVFIIDLISA
Specific function: PPIases accelerate the folding of proteins
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Cytoplasm And Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain
Homologues:
Organism=Homo sapiens, GI17149836, Length=92, Percent_Identity=42.3913043478261, Blast_Score=62, Evalue=9e-11, Organism=Homo sapiens, GI4503725, Length=92, Percent_Identity=42.3913043478261, Blast_Score=62, Evalue=9e-11, Organism=Escherichia coli, GI87082390, Length=95, Percent_Identity=46.3157894736842, Blast_Score=69, Evalue=6e-14, Organism=Escherichia coli, GI1789745, Length=100, Percent_Identity=40, Blast_Score=60, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6320727, Length=73, Percent_Identity=46.5753424657534, Blast_Score=68, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6324194, Length=107, Percent_Identity=40.1869158878505, Blast_Score=61, Evalue=4e-11, Organism=Drosophila melanogaster, GI281363946, Length=108, Percent_Identity=37.962962962963, Blast_Score=72, Evalue=7e-14, Organism=Drosophila melanogaster, GI17352457, Length=108, Percent_Identity=37.962962962963, Blast_Score=72, Evalue=7e-14, Organism=Drosophila melanogaster, GI24647110, Length=121, Percent_Identity=37.1900826446281, Blast_Score=72, Evalue=9e-14,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): FKBP_CORGL (P42458)
Other databases:
- EMBL: X66112 - EMBL: BA000036 - EMBL: BX927150 - PIR: I40718 - RefSeq: NP_600059.1 - RefSeq: YP_225122.1 - ProteinModelPortal: P42458 - SMR: P42458 - GeneID: 1018825 - GeneID: 3343627 - GenomeReviews: BA000036_GR - GenomeReviews: BX927147_GR - KEGG: cgb:cg0950 - KEGG: cgl:NCgl0796 - HOGENOM: HBG731200 - OMA: FESGEEF - ProtClustDB: CLSK811397 - BioCyc: CGLU196627:CG0950-MONOMER - BRENDA: 5.2.1.8 - InterPro: IPR001179 - PANTHER: PTHR10516
Pfam domain/function: PF00254 FKBP_C
EC number: =5.2.1.8
Molecular weight: Translated: 12539; Mature: 12539
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKPQIELPVGPAPEDLVISDIIVGEGAEARPGGEVEVHYVGVDFETGEEFDSSWDRGQT CCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC SQFPLNGLIAGWQEGIPGMKVGGRRQLTIPPEAAYGPEGSGHPLSGRTLVFIIDLISA CCCCCCCEEECHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MEKPQIELPVGPAPEDLVISDIIVGEGAEARPGGEVEVHYVGVDFETGEEFDSSWDRGQT CCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC SQFPLNGLIAGWQEGIPGMKVGGRRQLTIPPEAAYGPEGSGHPLSGRTLVFIIDLISA CCCCCCCEEECHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7522844; 12948626