| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138896763
Identifier: 138896763
GI number: 138896763
Start: 3225136
End: 3226431
Strand: Reverse
Name: 138896763
Synonym: GTNG_3126
Alternate gene names: NA
Gene position: 3226431-3225136 (Counterclockwise)
Preceding gene: 138896764
Following gene: 138896762
Centisome position: 90.88
GC content: 50.62
Gene sequence:
>1296_bases ATGCGAAAGAAAGCATCCGCATGGTTGGCGTTGGCGCTTGGTGTCGGGATGGCGCTGTCGGGCTGTAGCTCGAACTCTTC TTCATCCGATGACGCCAAACAAGGCAGCCAAAAAGCAGGAGAGAAGCTAGAGATTTTCAGCTGGTGGACTGGAGCCGGTG AGGAAGACGGTCTCAAAGCATTGATCAAACTGTTCCAAGAAAAACATCCGGATATTGAAGTCGAAAACGCGGCGGTAGCC GGCGGGGCCGGAACGAACGCCAAGGCGGTCCTAGCGAGCCGCATGCAAGGGGACGACCCGCCATCGACGTTCCAAGTGCA CGGTGGGGCGGAGCTGAATGAAGGTTGGGTCGCTGCCGGTAAAATGGAGCCACTCAATGACTTGTATGAACAAGAAGGTT GGATGGACAAATTCCCGGAAGCGCTCATTGACATGGTAAGCAAAGATGGCAACATTTACTCCGTTCCGGTGAACATTCAC CGCGGCAACGTGCTTTGGTACAACAAAAAAGTATTTGCCGACAACGGGCTGCAGCCGCCGAAAACATTTGACGAGTTTTT CGAAGTGGCGGATCAGCTAAAGGCAAAAGGCGTTACGCCGCTAGCACTTGGCGATAAAGAACCGTGGACCGCGACGCATT TGTTTGAAACGGTGTTGCTTGGCACACTCGGAACGGACAACTACCAAAAACTTTGGAACGGGGAACTGTCGTTTGACGCT CCACAAGTGAAACAAGCAGTTGAAACGTTTAAGAAAATGCTCGGTTACATTAACGAAGACCATAGCTCGCGCAACTGGCA AGATGCGGCTCAGCTTGTTGCGGAAGGAAAAGCGGCCATGTACGTGATGGGGGACTGGGCCAAAGGCTATTTTGTCAACG ACTTAAAATTAAAAGTGAATGAAGATTTCGGCTATGTGCCGACCCCGAACACCGACGGCAAGTTTATGGTCATTACTGAT ACGTTCGGCTTGCCAAAAGGTGTGAAAAATCCGGACGATGTGAAGAAGTTTTTAGCTTTGCTTGGATCGGTCGAGGGGCA AGATGCGTTTAACCCGCTGAAAGGCTCAATTCCAGCCCGTATCGATGCTGACCCGTCAAAGTATGACGAATACGGCAAAC AAACGATGGAAGATTTCAAAAACGCAGAACTGGCGCCAAGCTTAGCGCACGGATCAGCAGCGGCAGAAGGTTTTGTCACA AAAGTGAACCAAGCGATTAACATTTTCGTCACGCAAAAGGATGTCAATTCGTTGATTGACACGCTTGTTTCGGCTGCAGC GGAACTGAAGAAGTAA
Upstream 100 bases:
>100_bases ACGCAAAAAAGTGAAGGAATCAAGTCGTAATCAGACTAGTGGCGCATGATAAAATCACTATTGAAAAGGTTTTCAAAAAA GGGGATAAAGGGGGAGGAAC
Downstream 100 bases:
>100_bases TGAAGGAAAAGGGGACGGGAGCCATTCTCCTCCCCTTTTCTCGTATTCATCGCAAGGAGGGATGATGATGGAAACGGTAA AAATCGCGCCAGCGAAAGAA
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MRKKASAWLALALGVGMALSGCSSNSSSSDDAKQGSQKAGEKLEIFSWWTGAGEEDGLKALIKLFQEKHPDIEVENAAVA GGAGTNAKAVLASRMQGDDPPSTFQVHGGAELNEGWVAAGKMEPLNDLYEQEGWMDKFPEALIDMVSKDGNIYSVPVNIH RGNVLWYNKKVFADNGLQPPKTFDEFFEVADQLKAKGVTPLALGDKEPWTATHLFETVLLGTLGTDNYQKLWNGELSFDA PQVKQAVETFKKMLGYINEDHSSRNWQDAAQLVAEGKAAMYVMGDWAKGYFVNDLKLKVNEDFGYVPTPNTDGKFMVITD TFGLPKGVKNPDDVKKFLALLGSVEGQDAFNPLKGSIPARIDADPSKYDEYGKQTMEDFKNAELAPSLAHGSAAAEGFVT KVNQAINIFVTQKDVNSLIDTLVSAAAELKK
Sequences:
>Translated_431_residues MRKKASAWLALALGVGMALSGCSSNSSSSDDAKQGSQKAGEKLEIFSWWTGAGEEDGLKALIKLFQEKHPDIEVENAAVA GGAGTNAKAVLASRMQGDDPPSTFQVHGGAELNEGWVAAGKMEPLNDLYEQEGWMDKFPEALIDMVSKDGNIYSVPVNIH RGNVLWYNKKVFADNGLQPPKTFDEFFEVADQLKAKGVTPLALGDKEPWTATHLFETVLLGTLGTDNYQKLWNGELSFDA PQVKQAVETFKKMLGYINEDHSSRNWQDAAQLVAEGKAAMYVMGDWAKGYFVNDLKLKVNEDFGYVPTPNTDGKFMVITD TFGLPKGVKNPDDVKKFLALLGSVEGQDAFNPLKGSIPARIDADPSKYDEYGKQTMEDFKNAELAPSLAHGSAAAEGFVT KVNQAINIFVTQKDVNSLIDTLVSAAAELKK >Mature_431_residues MRKKASAWLALALGVGMALSGCSSNSSSSDDAKQGSQKAGEKLEIFSWWTGAGEEDGLKALIKLFQEKHPDIEVENAAVA GGAGTNAKAVLASRMQGDDPPSTFQVHGGAELNEGWVAAGKMEPLNDLYEQEGWMDKFPEALIDMVSKDGNIYSVPVNIH RGNVLWYNKKVFADNGLQPPKTFDEFFEVADQLKAKGVTPLALGDKEPWTATHLFETVLLGTLGTDNYQKLWNGELSFDA PQVKQAVETFKKMLGYINEDHSSRNWQDAAQLVAEGKAAMYVMGDWAKGYFVNDLKLKVNEDFGYVPTPNTDGKFMVITD TFGLPKGVKNPDDVKKFLALLGSVEGQDAFNPLKGSIPARIDADPSKYDEYGKQTMEDFKNAELAPSLAHGSAAAEGFVT KVNQAINIFVTQKDVNSLIDTLVSAAAELKK
Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 46872; Mature: 46872
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKASAWLALALGVGMALSGCSSNSSSSDDAKQGSQKAGEKLEIFSWWTGAGEEDGLKA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHH LIKLFQEKHPDIEVENAAVAGGAGTNAKAVLASRMQGDDPPSTFQVHGGAELNEGWVAAG HHHHHHHCCCCEEECCCEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECC KMEPLNDLYEQEGWMDKFPEALIDMVSKDGNIYSVPVNIHRGNVLWYNKKVFADNGLQPP CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEECEEECCCCCCCC KTFDEFFEVADQLKAKGVTPLALGDKEPWTATHLFETVLLGTLGTDNYQKLWNGELSFDA HHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC PQVKQAVETFKKMLGYINEDHSSRNWQDAAQLVAEGKAAMYVMGDWAKGYFVNDLKLKVN HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEEEC EDFGYVPTPNTDGKFMVITDTFGLPKGVKNPDDVKKFLALLGSVEGQDAFNPLKGSIPAR CCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE IDADPSKYDEYGKQTMEDFKNAELAPSLAHGSAAAEGFVTKVNQAINIFVTQKDVNSLID ECCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCEEEEEEEHHHHHHHHH TLVSAAAELKK HHHHHHHHHCC >Mature Secondary Structure MRKKASAWLALALGVGMALSGCSSNSSSSDDAKQGSQKAGEKLEIFSWWTGAGEEDGLKA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHH LIKLFQEKHPDIEVENAAVAGGAGTNAKAVLASRMQGDDPPSTFQVHGGAELNEGWVAAG HHHHHHHCCCCEEECCCEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECC KMEPLNDLYEQEGWMDKFPEALIDMVSKDGNIYSVPVNIHRGNVLWYNKKVFADNGLQPP CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEECEEECCCCCCCC KTFDEFFEVADQLKAKGVTPLALGDKEPWTATHLFETVLLGTLGTDNYQKLWNGELSFDA HHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC PQVKQAVETFKKMLGYINEDHSSRNWQDAAQLVAEGKAAMYVMGDWAKGYFVNDLKLKVN HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEEEC EDFGYVPTPNTDGKFMVITDTFGLPKGVKNPDDVKKFLALLGSVEGQDAFNPLKGSIPAR CCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE IDADPSKYDEYGKQTMEDFKNAELAPSLAHGSAAAEGFVTKVNQAINIFVTQKDVNSLID ECCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCEEEEEEEHHHHHHHHH TLVSAAAELKK HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]