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The map label for this gene is ugpA [C]

Identifier: 138896762

GI number: 138896762

Start: 3224097

End: 3225074

Strand: Reverse

Name: ugpA [C]

Synonym: GTNG_3125

Alternate gene names: 138896762

Gene position: 3225074-3224097 (Counterclockwise)

Preceding gene: 138896763

Following gene: 138896761

Centisome position: 90.84

GC content: 48.36

Gene sequence:

>978_bases
ATGATGATGGAAACGGTAAAAATCGCGCCAGCGAAAGAAACGACGACCGTTCCTGTGGCGCGGAAAAAGCGAAAATGGAC
AGCTGATCATTGGCTGGCAACAGCGTTTTTGGCGCCGTCGGTCGTGCTCATTTTCCTATTTGTTTATGGATTTATCGGTT
GGACAGGATATGTTTCGGTAAGCAATTGGAATTCGCTCGTTCCGGATTGGTCATTCGCCGGGCTGAAAAATTATCAGTAT
TTATTCCAAGATTTCCGCTTTCAAGCTGATTTGCGCAATACGATCGTATTTACAGTGCTGTTTATCGCCGTCGTGATTGT
GCTCGGCCAACTGCTTGCTATTTTGCTTGACCAAAAGCTGCGAGGGGAATCGTTGTTTCGCAACATTTTCTTTTTCCCGA
TGGCCTTATCCTTTGTTGTGACCGGGGTGGTGTGGCAATGGTTGTTTAACCCGTCAACGGGCGTGAACTTGTTTTTAAAA
CCGCTTGGCCTAGATTCCAAATGGTATACGGATACAACGATCTTAGGCGGATTTCAATGGGGCAAAATCGAATTTGGCAT
CCCATTGGCGATGATTGCGGTTGTGGTGGCAGCGGTCTGGCAAATGACCGGTTTTGCCGTCGCCATGTATTTGGCCGGCT
TGCGTGCGATTCCGGATGAAGTGCGCGAAGCGGCGCGAATGGATGGAGCGACCGAGCTTCAATTGTATTGGAAAATCATT
TTGCCGCTGTTGCGGCCGATTACGGTCAGTGTCATCATCATTATGGCGCACATTTCACTGAAAATTTTTGATTTAATTTA
CGCCATGACCGGACCGGGTGCGAACTTTGTCACTGATGTGCCCGGAGTGTATATGTTTGAAACGACGTTCCGCGGCAATT
ATTATGCGAACGGAGCGGCGATTGCGATTGTGATGTTGCTGTCGGTCGCCATTTTTATCGTTCCGTATCTCATCTCGAGC
CGCAAGGGGGAATCGTAA

Upstream 100 bases:

>100_bases
GACACGCTTGTTTCGGCTGCAGCGGAACTGAAGAAGTAATGAAGGAAAAGGGGACGGGAGCCATTCTCCTCCCCTTTTCT
CGTATTCATCGCAAGGAGGG

Downstream 100 bases:

>100_bases
TGGCGAAACAGTTATGGGCGCGGCCATTTTTGTATCTGCTTGCACTGGCGATGAGCGTATTTTTCCTCTTGCCAGTGTAT
GTCATGATTGTGACGAGCTT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MMMETVKIAPAKETTTVPVARKKRKWTADHWLATAFLAPSVVLIFLFVYGFIGWTGYVSVSNWNSLVPDWSFAGLKNYQY
LFQDFRFQADLRNTIVFTVLFIAVVIVLGQLLAILLDQKLRGESLFRNIFFFPMALSFVVTGVVWQWLFNPSTGVNLFLK
PLGLDSKWYTDTTILGGFQWGKIEFGIPLAMIAVVVAAVWQMTGFAVAMYLAGLRAIPDEVREAARMDGATELQLYWKII
LPLLRPITVSVIIIMAHISLKIFDLIYAMTGPGANFVTDVPGVYMFETTFRGNYYANGAAIAIVMLLSVAIFIVPYLISS
RKGES

Sequences:

>Translated_325_residues
MMMETVKIAPAKETTTVPVARKKRKWTADHWLATAFLAPSVVLIFLFVYGFIGWTGYVSVSNWNSLVPDWSFAGLKNYQY
LFQDFRFQADLRNTIVFTVLFIAVVIVLGQLLAILLDQKLRGESLFRNIFFFPMALSFVVTGVVWQWLFNPSTGVNLFLK
PLGLDSKWYTDTTILGGFQWGKIEFGIPLAMIAVVVAAVWQMTGFAVAMYLAGLRAIPDEVREAARMDGATELQLYWKII
LPLLRPITVSVIIIMAHISLKIFDLIYAMTGPGANFVTDVPGVYMFETTFRGNYYANGAAIAIVMLLSVAIFIVPYLISS
RKGES
>Mature_325_residues
MMMETVKIAPAKETTTVPVARKKRKWTADHWLATAFLAPSVVLIFLFVYGFIGWTGYVSVSNWNSLVPDWSFAGLKNYQY
LFQDFRFQADLRNTIVFTVLFIAVVIVLGQLLAILLDQKLRGESLFRNIFFFPMALSFVVTGVVWQWLFNPSTGVNLFLK
PLGLDSKWYTDTTILGGFQWGKIEFGIPLAMIAVVVAAVWQMTGFAVAMYLAGLRAIPDEVREAARMDGATELQLYWKII
LPLLRPITVSVIIIMAHISLKIFDLIYAMTGPGANFVTDVPGVYMFETTFRGNYYANGAAIAIVMLLSVAIFIVPYLISS
RKGES

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=303, Percent_Identity=25.0825082508251, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1790465, Length=283, Percent_Identity=27.5618374558304, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787570, Length=256, Percent_Identity=27.34375, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36464; Mature: 36464

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMETVKIAPAKETTTVPVARKKRKWTADHWLATAFLAPSVVLIFLFVYGFIGWTGYVSV
CCCCCEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEE
SNWNSLVPDWSFAGLKNYQYLFQDFRFQADLRNTIVFTVLFIAVVIVLGQLLAILLDQKL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGESLFRNIFFFPMALSFVVTGVVWQWLFNPSTGVNLFLKPLGLDSKWYTDTTILGGFQW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEECCCEE
GKIEFGIPLAMIAVVVAAVWQMTGFAVAMYLAGLRAIPDEVREAARMDGATELQLYWKII
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHH
LPLLRPITVSVIIIMAHISLKIFDLIYAMTGPGANFVTDVPGVYMFETTFRGNYYANGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEECCHHH
IAIVMLLSVAIFIVPYLISSRKGES
HHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMMETVKIAPAKETTTVPVARKKRKWTADHWLATAFLAPSVVLIFLFVYGFIGWTGYVSV
CCCCCEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEE
SNWNSLVPDWSFAGLKNYQYLFQDFRFQADLRNTIVFTVLFIAVVIVLGQLLAILLDQKL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGESLFRNIFFFPMALSFVVTGVVWQWLFNPSTGVNLFLKPLGLDSKWYTDTTILGGFQW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEECCCEE
GKIEFGIPLAMIAVVVAAVWQMTGFAVAMYLAGLRAIPDEVREAARMDGATELQLYWKII
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHH
LPLLRPITVSVIIIMAHISLKIFDLIYAMTGPGANFVTDVPGVYMFETTFRGNYYANGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEECCHHH
IAIVMLLSVAIFIVPYLISSRKGES
HHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]