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The map label for this gene is ycjP [C]

Identifier: 138896761

GI number: 138896761

Start: 3223276

End: 3224097

Strand: Reverse

Name: ycjP [C]

Synonym: GTNG_3124

Alternate gene names: 138896761

Gene position: 3224097-3223276 (Counterclockwise)

Preceding gene: 138896762

Following gene: 138896760

Centisome position: 90.81

GC content: 48.18

Gene sequence:

>822_bases
ATGGCGAAACAGTTATGGGCGCGGCCATTTTTGTATCTGCTTGCACTGGCGATGAGCGTATTTTTCCTCTTGCCAGTGTA
TGTCATGATTGTGACGAGCTTAAAACCGCTCGATGAAGTGACATTGGCTGACATGTGGAAACTGCCGTCAGCGGTCGATT
GGAGCAGCTATGCGACCGCATTTGAGAAACTGGCTCCAAACTTTTGGAACTCGATTTTGCTTGTCGTACCAGCGACACTG
CTATCCGCATTGCTAGGGTCACTCAACGGTTATGTGCTGTCGAAGTGGAAGTTTAAAGGGGCGGATACGCTATTTACGCT
CATTTTATTTGGCATGTTCATTCCATATCAAAGCATCTTAATTCCGTTGATTCAATTTTTGCGCGAAATCGGGTTGTACA
ACACGATTCCGGGGCTGGTGTTCGTCCATGTTGTCTACGGCATCCCGATCACAACACTGATGTTCCGCAATTTTTACGCC
GCCATTCCGGATGAGATGATCGAATCGGCGAAAATCGACGGCGCCGGGTTTGTCCGCATTTTCCGTTACATTATGCTGCC
GTTGTCGATCACCGGATTTGTCGTTGTTGCTATTTGGCAGTTTACGAATATTTGGAATGAGTTTTTGTTTGCCGTGACGA
TCACGACGTCGGACAAACAACCGATCATGGTTGCCTTGCAAAACTTATCCGGCAGTCAAATTGTCCAGTGGAACGTACAA
ATGGCCGGCGCTTTGTTGGCTGCACTGCCAACGTTGTTCGTATACATCTTCCTTGGCAAATACTTCGTCCGTGGACTGCT
TGCCGGCTCGGTGAAAGGATGA

Upstream 100 bases:

>100_bases
ATTATTATGCGAACGGAGCGGCGATTGCGATTGTGATGTTGCTGTCGGTCGCCATTTTTATCGTTCCGTATCTCATCTCG
AGCCGCAAGGGGGAATCGTA

Downstream 100 bases:

>100_bases
GTTGGTGGAAAGGGCAACGGGTGTGTCAGGAGGAGCTGCCTTGTTGGCGGCTCTTTTTCGTTTGGTAAAAATAGTGGCAA
CAATATTCATTTGCCGCTCG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAKQLWARPFLYLLALAMSVFFLLPVYVMIVTSLKPLDEVTLADMWKLPSAVDWSSYATAFEKLAPNFWNSILLVVPATL
LSALLGSLNGYVLSKWKFKGADTLFTLILFGMFIPYQSILIPLIQFLREIGLYNTIPGLVFVHVVYGIPITTLMFRNFYA
AIPDEMIESAKIDGAGFVRIFRYIMLPLSITGFVVVAIWQFTNIWNEFLFAVTITTSDKQPIMVALQNLSGSQIVQWNVQ
MAGALLAALPTLFVYIFLGKYFVRGLLAGSVKG

Sequences:

>Translated_273_residues
MAKQLWARPFLYLLALAMSVFFLLPVYVMIVTSLKPLDEVTLADMWKLPSAVDWSSYATAFEKLAPNFWNSILLVVPATL
LSALLGSLNGYVLSKWKFKGADTLFTLILFGMFIPYQSILIPLIQFLREIGLYNTIPGLVFVHVVYGIPITTLMFRNFYA
AIPDEMIESAKIDGAGFVRIFRYIMLPLSITGFVVVAIWQFTNIWNEFLFAVTITTSDKQPIMVALQNLSGSQIVQWNVQ
MAGALLAALPTLFVYIFLGKYFVRGLLAGSVKG
>Mature_272_residues
AKQLWARPFLYLLALAMSVFFLLPVYVMIVTSLKPLDEVTLADMWKLPSAVDWSSYATAFEKLAPNFWNSILLVVPATLL
SALLGSLNGYVLSKWKFKGADTLFTLILFGMFIPYQSILIPLIQFLREIGLYNTIPGLVFVHVVYGIPITTLMFRNFYAA
IPDEMIESAKIDGAGFVRIFRYIMLPLSITGFVVVAIWQFTNIWNEFLFAVTITTSDKQPIMVALQNLSGSQIVQWNVQM
AGALLAALPTLFVYIFLGKYFVRGLLAGSVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=260, Percent_Identity=28.8461538461538, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1789860, Length=207, Percent_Identity=25.6038647342995, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1790464, Length=244, Percent_Identity=27.4590163934426, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30607; Mature: 30476

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQLWARPFLYLLALAMSVFFLLPVYVMIVTSLKPLDEVTLADMWKLPSAVDWSSYATA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHH
FEKLAPNFWNSILLVVPATLLSALLGSLNGYVLSKWKFKGADTLFTLILFGMFIPYQSIL
HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
IPLIQFLREIGLYNTIPGLVFVHVVYGIPITTLMFRNFYAAIPDEMIESAKIDGAGFVRI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHH
FRYIMLPLSITGFVVVAIWQFTNIWNEFLFAVTITTSDKQPIMVALQNLSGSQIVQWNVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHCCCCCEEEEEHHH
MAGALLAALPTLFVYIFLGKYFVRGLLAGSVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AKQLWARPFLYLLALAMSVFFLLPVYVMIVTSLKPLDEVTLADMWKLPSAVDWSSYATA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHH
FEKLAPNFWNSILLVVPATLLSALLGSLNGYVLSKWKFKGADTLFTLILFGMFIPYQSIL
HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
IPLIQFLREIGLYNTIPGLVFVHVVYGIPITTLMFRNFYAAIPDEMIESAKIDGAGFVRI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHH
FRYIMLPLSITGFVVVAIWQFTNIWNEFLFAVTITTSDKQPIMVALQNLSGSQIVQWNVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHCCCCCEEEEEHHH
MAGALLAALPTLFVYIFLGKYFVRGLLAGSVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]