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The map label for this gene is immA [H]

Identifier: 138896498

GI number: 138896498

Start: 2964473

End: 2964913

Strand: Direct

Name: immA [H]

Synonym: GTNG_2861

Alternate gene names: 138896498

Gene position: 2964473-2964913 (Clockwise)

Preceding gene: 138896497

Following gene: 138896499

Centisome position: 83.5

GC content: 46.26

Gene sequence:

>441_bases
ATGGCTGAGAAGATCAAACAAATCGCAGAGAACCTGATCCGAAAGCACGGCACGAACAACCCCTTCGAGATTGCATCACA
GAAAGGCATTGTGCTGTTGTTTGAGCCGCTGGGCGGGATATACGGGTATCATCATACGTTCCGTCGGATTCAGATCATTC
ACATCAATTCAGAGTTGGACGAGCCAATGAAACGCTTCGTCTGCGCACACGAGCTAGGACATGCGGTGTTGCATCCCGAA
CTTAGCACCTCATTTTTGCGAAAAAACACTCTTTTCTGCATGGACAAGGTGGAGCGAGAAGCGAATGAGTTTGCAGTGGA
ATTGCTTCTTCCAGATGATTGTCTTTATACATATCGAAATACCGATATGACCATTTATGAGGCCGCTAAAACGTACGGAA
TTCCCAAGGAGGTGGTGCATCTAAAAAATTTTGACCACTGA

Upstream 100 bases:

>100_bases
CGCTGGAAAACTCGCTTCGTCTCGCCAAACGTATCGCAAAGCAAAAATTCACACCAAAAAAATATCGTAAAGAAGAATAA
ACATCTCAGGGGGGTTCGCT

Downstream 100 bases:

>100_bases
ACCAAACATACATTCTCACAGGGAGGGAGATGACGTGGCAAGCATTCAAAAAATGAAAAACGGCCGCTGGCGTTATCGTG
TGTCTTATAAGGAGAATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MAEKIKQIAENLIRKHGTNNPFEIASQKGIVLLFEPLGGIYGYHHTFRRIQIIHINSELDEPMKRFVCAHELGHAVLHPE
LSTSFLRKNTLFCMDKVEREANEFAVELLLPDDCLYTYRNTDMTIYEAAKTYGIPKEVVHLKNFDH

Sequences:

>Translated_146_residues
MAEKIKQIAENLIRKHGTNNPFEIASQKGIVLLFEPLGGIYGYHHTFRRIQIIHINSELDEPMKRFVCAHELGHAVLHPE
LSTSFLRKNTLFCMDKVEREANEFAVELLLPDDCLYTYRNTDMTIYEAAKTYGIPKEVVHLKNFDH
>Mature_145_residues
AEKIKQIAENLIRKHGTNNPFEIASQKGIVLLFEPLGGIYGYHHTFRRIQIIHINSELDEPMKRFVCAHELGHAVLHPEL
STSFLRKNTLFCMDKVEREANEFAVELLLPDDCLYTYRNTDMTIYEAAKTYGIPKEVVHLKNFDH

Specific function: Involved in the regulation of horizontal gene transfer through the integrative and conjugative element ICEBs1. Required for degradation of the ICEBs1 repressor protein immR/ydcN [H]

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010359 [H]

Pfam domain/function: PF06114 DUF955 [H]

EC number: NA

Molecular weight: Translated: 16942; Mature: 16811

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKIKQIAENLIRKHGTNNPFEIASQKGIVLLFEPLGGIYGYHHTFRRIQIIHINSELD
CHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEECCCCCHHHHHHHHEEEEEEEECCHHH
EPMKRFVCAHELGHAVLHPELSTSFLRKNTLFCMDKVEREANEFAVELLLPDDCLYTYRN
HHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEECC
TDMTIYEAAKTYGIPKEVVHLKNFDH
CCEEEEHHHHHHCCHHHHHHHCCCCC
>Mature Secondary Structure 
AEKIKQIAENLIRKHGTNNPFEIASQKGIVLLFEPLGGIYGYHHTFRRIQIIHINSELD
HHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEECCCCCHHHHHHHHEEEEEEEECCHHH
EPMKRFVCAHELGHAVLHPELSTSFLRKNTLFCMDKVEREANEFAVELLLPDDCLYTYRN
HHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEECC
TDMTIYEAAKTYGIPKEVVHLKNFDH
CCEEEEHHHHHHCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]