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The map label for this gene is rsiX [H]

Identifier: 138895827

GI number: 138895827

Start: 2311970

End: 2313076

Strand: Reverse

Name: rsiX [H]

Synonym: GTNG_2186

Alternate gene names: 138895827

Gene position: 2313076-2311970 (Counterclockwise)

Preceding gene: 138895828

Following gene: 138895826

Centisome position: 65.15

GC content: 57.27

Gene sequence:

>1107_bases
ATGAAAAAGCTCAACTGGAATGAGCGATGTATTCAACACGGACTTGAACAGTTGCCCGTTGTCAAAGACCGCCGCGCGAA
AGAGGATATTTACGAGCGGCTAGAGCGCGCCCGACGAGCGGCACGCTGGAAACGGCGCTGGCTTCCGGCAGTTGCGTCGG
CGGCGGTGCTTGTTGCGGCTGCGTTTGCCGCTCCTCGTCTAATCATTCCGGAACCGGCGGACAAACAGGTAGCCTCTTCA
TCTGCCGTTCAGACATGGCGAGCGAACGATGTTTCTTCCCATCCAGAAGCGATGATGGCGACCGAGGTGTCGAATGAAGC
GGTAAGTAAAGCGGTAATCGCCTTACCTGACCGGAAAATTGGCATGGTTGTACCGGTAGTTGTCCCGCTTTTCGGCCGTT
TTGCCCTGGAAGAACGGCTGACGGCAGCGTTGGATGAGCTCAACCGCTCCTCGTTACGAAGCGCAGCCAAATGGCTTGAT
GGCATAACGATGGCACCAGAAGCAGGCGACAGGGGCACTTGGGCGGTGCGCGTTCCGGCCGACCATCGCATATTTACCGC
TGATCGCGAGGAGCAGCAGCTGTTTTTCATGGCGGTGGTGGAAACCGTGCGGCAAATGGGCGGACAGAATATCCGCTTTT
TCACCGGAGCGGAGGAAGGTCTTGACCTATCAGCATCTGGACCGTTGAAAACGACAAAAGTGGATCAGCAAAAACGAATT
TATTATATAAACCGCCTTTCTTCGTTCGGCCATGCCGTGCTCATTTCAGTACCGAGCTCCGCCCGCTCGTTTTCCGAGGC
GGTGCAGCGGATGAAAAAACCGGGCGGCCGTGGGCTTGAGCCGGCGATTCCACCGGAAGTGAAGGTGGATCACGTTCATG
CCAGTGGGCGTCATGCCACTGTTTCACTTCGCTTTTCCGCTTCGCTGGACGCAGCGGATGCGGCGCGCATGGCAGAAGCG
ATTTTATTGACGGCGAAAGAGTTTGGCTTGCTTGAGGTGACGTTGGCGGCTAATGGCCGCTCGTCCATCGGTCCGTATCC
GCTCGGGGAGCGGATTAAGGTGCCGGCCGGTCCGAACGAGGAACTATTGACGGCAGGCGGCCGATAG

Upstream 100 bases:

>100_bases
CTTGGCTGGACGGAGAGCAAAGTAAAAACGACGCAACACCGCGCGTTAAAGGCGCTGAAGCAATATATGGAGGAAGAGGC
AGAACGGGAGGGGTGGCAAC

Downstream 100 bases:

>100_bases
CGGCCGATGCCTCCTTTTGGTCATTTTACGGGGGCGTTTTGTTACAGTTTTGTTAATGTCGGCGTCGTGTTGTTCTATCG
ATCATCGTTTTGACATAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKKLNWNERCIQHGLEQLPVVKDRRAKEDIYERLERARRAARWKRRWLPAVASAAVLVAAAFAAPRLIIPEPADKQVASS
SAVQTWRANDVSSHPEAMMATEVSNEAVSKAVIALPDRKIGMVVPVVVPLFGRFALEERLTAALDELNRSSLRSAAKWLD
GITMAPEAGDRGTWAVRVPADHRIFTADREEQQLFFMAVVETVRQMGGQNIRFFTGAEEGLDLSASGPLKTTKVDQQKRI
YYINRLSSFGHAVLISVPSSARSFSEAVQRMKKPGGRGLEPAIPPEVKVDHVHASGRHATVSLRFSASLDAADAARMAEA
ILLTAKEFGLLEVTLAANGRSSIGPYPLGERIKVPAGPNEELLTAGGR

Sequences:

>Translated_368_residues
MKKLNWNERCIQHGLEQLPVVKDRRAKEDIYERLERARRAARWKRRWLPAVASAAVLVAAAFAAPRLIIPEPADKQVASS
SAVQTWRANDVSSHPEAMMATEVSNEAVSKAVIALPDRKIGMVVPVVVPLFGRFALEERLTAALDELNRSSLRSAAKWLD
GITMAPEAGDRGTWAVRVPADHRIFTADREEQQLFFMAVVETVRQMGGQNIRFFTGAEEGLDLSASGPLKTTKVDQQKRI
YYINRLSSFGHAVLISVPSSARSFSEAVQRMKKPGGRGLEPAIPPEVKVDHVHASGRHATVSLRFSASLDAADAARMAEA
ILLTAKEFGLLEVTLAANGRSSIGPYPLGERIKVPAGPNEELLTAGGR
>Mature_368_residues
MKKLNWNERCIQHGLEQLPVVKDRRAKEDIYERLERARRAARWKRRWLPAVASAAVLVAAAFAAPRLIIPEPADKQVASS
SAVQTWRANDVSSHPEAMMATEVSNEAVSKAVIALPDRKIGMVVPVVVPLFGRFALEERLTAALDELNRSSLRSAAKWLD
GITMAPEAGDRGTWAVRVPADHRIFTADREEQQLFFMAVVETVRQMGGQNIRFFTGAEEGLDLSASGPLKTTKVDQQKRI
YYINRLSSFGHAVLISVPSSARSFSEAVQRMKKPGGRGLEPAIPPEVKVDHVHASGRHATVSLRFSASLDAADAARMAEA
ILLTAKEFGLLEVTLAANGRSSIGPYPLGERIKVPAGPNEELLTAGGR

Specific function: Inhibits sigX activity and stabilizes the sigX protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40240; Mature: 40240

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLNWNERCIQHGLEQLPVVKDRRAKEDIYERLERARRAARWKRRWLPAVASAAVLVAA
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAAPRLIIPEPADKQVASSSAVQTWRANDVSSHPEAMMATEVSNEAVSKAVIALPDRKI
HHHCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCC
GMVVPVVVPLFGRFALEERLTAALDELNRSSLRSAAKWLDGITMAPEAGDRGTWAVRVPA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCC
DHRIFTADREEQQLFFMAVVETVRQMGGQNIRFFTGAEEGLDLSASGPLKTTKVDQQKRI
CCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHH
YYINRLSSFGHAVLISVPSSARSFSEAVQRMKKPGGRGLEPAIPPEVKVDHVHASGRHAT
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEE
VSLRFSASLDAADAARMAEAILLTAKEFGLLEVTLAANGRSSIGPYPLGERIKVPAGPNE
EEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCH
ELLTAGGR
HHHCCCCC
>Mature Secondary Structure
MKKLNWNERCIQHGLEQLPVVKDRRAKEDIYERLERARRAARWKRRWLPAVASAAVLVAA
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAAPRLIIPEPADKQVASSSAVQTWRANDVSSHPEAMMATEVSNEAVSKAVIALPDRKI
HHHCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCC
GMVVPVVVPLFGRFALEERLTAALDELNRSSLRSAAKWLDGITMAPEAGDRGTWAVRVPA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCC
DHRIFTADREEQQLFFMAVVETVRQMGGQNIRFFTGAEEGLDLSASGPLKTTKVDQQKRI
CCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHH
YYINRLSSFGHAVLISVPSSARSFSEAVQRMKKPGGRGLEPAIPPEVKVDHVHASGRHAT
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEE
VSLRFSASLDAADAARMAEAILLTAKEFGLLEVTLAANGRSSIGPYPLGERIKVPAGPNE
EEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCH
ELLTAGGR
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 9393439 [H]