Definition Geobacillus thermodenitrificans NG80-2 chromosome, complete genome.
Accession NC_009328
Length 3,550,319

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The map label for this gene is ypjA [H]

Identifier: 138895767

GI number: 138895767

Start: 2255394

End: 2255993

Strand: Reverse

Name: ypjA [H]

Synonym: GTNG_2123

Alternate gene names: 138895767

Gene position: 2255993-2255394 (Counterclockwise)

Preceding gene: 138895768

Following gene: 138895766

Centisome position: 63.54

GC content: 52.83

Gene sequence:

>600_bases
ATGGCATGGCTTTATGCGATATTCGCTTCCCGGCCGGTTGTTTCGCTACTTTTGCTTGTGAATGCTGCCGGCACCGTTTA
CGGCTATTATTGGTATCGTTATCAGTTGGCGGAAACACCGCCCTTGTTTTTGCCATTTGTGCCCGACAGTCCGACGGCGA
GTCTTTTTTTTCTCATCGTTCTCGGCGCCTGGCTGCTCGGTCGGCAGACACCGCTGTTTGAAGCCCTTGCCCTTGTGACA
CTTGTCAAATACGGGATTTGGGCGGTCGTCATGAACGTGCTCGTTTGGCGCGTCACCGGAACGCTTGACTGGGCAGGATG
GATGCTCATCGTTTCCCATGGGGTCATGGCGGTCGAAGGCATGCTGTACGCTCCGCTTTACCGATTTCGTCCGGTTCATC
TTGCTTTGGCAGCGGTTTGGACGCTGCATAACGATGTCATCGACTACGTATTTGGCATGATGCCACGTTATCATATGTTG
GATCATTATGCTGATCAAATCGGTTATTTTACGTTTTGGCTCAGCATTGCCTCCATTGCTGTGGCGTATTGGCTTGGCAT
CCGCACACGGCGACAGTCGTTCTCGCTTCCTCCCGCATAG

Upstream 100 bases:

>100_bases
TCGCCGGCTTAAAAGCTGAATAATCGTTTCACACGAAAAAGCTGACTCGCGTTAGTCAGCTTTTTTCGTACCTACATTGA
ATTGAGATGAGGTGCAAACG

Downstream 100 bases:

>100_bases
CAGTGGAATAGGAGTAACAAGGGAGGAAAATTTGCCCTATCGCTTGATCGCAGTTGCTTGGTCTACTCTTGTCCACTCCT
TCATACATTGTAGTAGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MAWLYAIFASRPVVSLLLLVNAAGTVYGYYWYRYQLAETPPLFLPFVPDSPTASLFFLIVLGAWLLGRQTPLFEALALVT
LVKYGIWAVVMNVLVWRVTGTLDWAGWMLIVSHGVMAVEGMLYAPLYRFRPVHLALAAVWTLHNDVIDYVFGMMPRYHML
DHYADQIGYFTFWLSIASIAVAYWLGIRTRRQSFSLPPA

Sequences:

>Translated_199_residues
MAWLYAIFASRPVVSLLLLVNAAGTVYGYYWYRYQLAETPPLFLPFVPDSPTASLFFLIVLGAWLLGRQTPLFEALALVT
LVKYGIWAVVMNVLVWRVTGTLDWAGWMLIVSHGVMAVEGMLYAPLYRFRPVHLALAAVWTLHNDVIDYVFGMMPRYHML
DHYADQIGYFTFWLSIASIAVAYWLGIRTRRQSFSLPPA
>Mature_198_residues
AWLYAIFASRPVVSLLLLVNAAGTVYGYYWYRYQLAETPPLFLPFVPDSPTASLFFLIVLGAWLLGRQTPLFEALALVTL
VKYGIWAVVMNVLVWRVTGTLDWAGWMLIVSHGVMAVEGMLYAPLYRFRPVHLALAAVWTLHNDVIDYVFGMMPRYHMLD
HYADQIGYFTFWLSIASIAVAYWLGIRTRRQSFSLPPA

Specific function: Unknown

COG id: COG4347

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009845 [H]

Pfam domain/function: PF07187 DUF1405 [H]

EC number: NA

Molecular weight: Translated: 22732; Mature: 22601

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWLYAIFASRPVVSLLLLVNAAGTVYGYYWYRYQLAETPPLFLPFVPDSPTASLFFLIV
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCHHHHHHHHH
LGAWLLGRQTPLFEALALVTLVKYGIWAVVMNVLVWRVTGTLDWAGWMLIVSHGVMAVEG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH
MLYAPLYRFRPVHLALAAVWTLHNDVIDYVFGMMPRYHMLDHYADQIGYFTFWLSIASIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VAYWLGIRTRRQSFSLPPA
HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AWLYAIFASRPVVSLLLLVNAAGTVYGYYWYRYQLAETPPLFLPFVPDSPTASLFFLIV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCHHHHHHHHH
LGAWLLGRQTPLFEALALVTLVKYGIWAVVMNVLVWRVTGTLDWAGWMLIVSHGVMAVEG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH
MLYAPLYRFRPVHLALAAVWTLHNDVIDYVFGMMPRYHMLDHYADQIGYFTFWLSIASIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VAYWLGIRTRRQSFSLPPA
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]