| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is yhaX [H]
Identifier: 138894226
GI number: 138894226
Start: 613756
End: 614622
Strand: Direct
Name: yhaX [H]
Synonym: GTNG_0552
Alternate gene names: 138894226
Gene position: 613756-614622 (Clockwise)
Preceding gene: 138894225
Following gene: 138894227
Centisome position: 17.29
GC content: 48.9
Gene sequence:
>867_bases GTGTATTATAAGCTGTTAGCACTCAACATTGATGGAACGATTTTGAAAAATAACGGCCGCCTGCCACGTGAAACGAAAGA GGCGGTCGCCTATGTGAAGCGAAAAGGAGTTTACGTCACGTTAATGACAAGTCGCAATTTGCTCTCCGCCCGCAAGGTGG CAAAAGCACTGCGACTTGATGGGATGCTCATCACCTTTCAAGGGGCGATGATCGGCAAAACGCTTGATGACAAACTGTTT GAAGCGGTGATTCCTGAAGAGCGGACGTTTAACATCGTGCAAATTTTAGAAAACTTTAACTGCAATATTCGTCTGATGCA TGAGCGGTATTCGCTCGGTAACCGGAAAAAAGTGAAAAAAAATCTCGTCGTACAGACGGTGCTCTCGTCAAGCGACCCAT TTTTCTACCCGACCCAGTTTGTCGATTCACTCGGCGATGTGCTGATCGATGAACCGGTGGCCGTGCCGAAAATCGATGTT TATTTTGCCGAGGATGAGGAGCGGGATGAGGCCGCAGCTGTGCTGGCAAAATCTGTTCCATCCATTGATATGATTATGCA TCCGAACGGAAAAATGGAAATTGTCCCGCAAGGGGTATCTAAGCTCACTGGACTGCGTCGGCTTGCTCAACATATCGGTG TATCGCTGAAAGAAACGGTAGTGATTGGCGATGGTGTTGACGATTTGCCGGCAATTGAGGCAGCTGGGCTTGGCGTCGCC ATGGGCAATGCACCGGTCGAGGTGAAGAGGGCAGCCGATTGGGTGACGCGCTCAAACGAACAGCTCGGCGTCGCTTACAT GGTGAAGGAACATTTCCGCAAACAACAACGAATAGAGTTTTTGCAAAAGCTCAAAACGAAACAGTAA
Upstream 100 bases:
>100_bases TAGTCATGAGAATGATAAGAAATGCAAAGCTGCCGCTAGCAGATGAAGAGGCGGCTTTAGTTGACGGAAAACGAGGCACA GACAAAAGGGGGAGACAGCC
Downstream 100 bases:
>100_bases AGGGCAAGGGAGGGTGTTCCAAAAGAAGAGGGACACCTTTTTTCTTGTCTATGCGCATGAAACAATATATTTTACTTCTC AAAGAAAAATGAGCTGTTCA
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MYYKLLALNIDGTILKNNGRLPRETKEAVAYVKRKGVYVTLMTSRNLLSARKVAKALRLDGMLITFQGAMIGKTLDDKLF EAVIPEERTFNIVQILENFNCNIRLMHERYSLGNRKKVKKNLVVQTVLSSSDPFFYPTQFVDSLGDVLIDEPVAVPKIDV YFAEDEERDEAAAVLAKSVPSIDMIMHPNGKMEIVPQGVSKLTGLRRLAQHIGVSLKETVVIGDGVDDLPAIEAAGLGVA MGNAPVEVKRAADWVTRSNEQLGVAYMVKEHFRKQQRIEFLQKLKTKQ
Sequences:
>Translated_288_residues MYYKLLALNIDGTILKNNGRLPRETKEAVAYVKRKGVYVTLMTSRNLLSARKVAKALRLDGMLITFQGAMIGKTLDDKLF EAVIPEERTFNIVQILENFNCNIRLMHERYSLGNRKKVKKNLVVQTVLSSSDPFFYPTQFVDSLGDVLIDEPVAVPKIDV YFAEDEERDEAAAVLAKSVPSIDMIMHPNGKMEIVPQGVSKLTGLRRLAQHIGVSLKETVVIGDGVDDLPAIEAAGLGVA MGNAPVEVKRAADWVTRSNEQLGVAYMVKEHFRKQQRIEFLQKLKTKQ >Mature_288_residues MYYKLLALNIDGTILKNNGRLPRETKEAVAYVKRKGVYVTLMTSRNLLSARKVAKALRLDGMLITFQGAMIGKTLDDKLF EAVIPEERTFNIVQILENFNCNIRLMHERYSLGNRKKVKKNLVVQTVLSSSDPFFYPTQFVDSLGDVLIDEPVAVPKIDV YFAEDEERDEAAAVLAKSVPSIDMIMHPNGKMEIVPQGVSKLTGLRRLAQHIGVSLKETVVIGDGVDDLPAIEAAGLGVA MGNAPVEVKRAADWVTRSNEQLGVAYMVKEHFRKQQRIEFLQKLKTKQ
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI2367265, Length=289, Percent_Identity=28.719723183391, Blast_Score=90, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR013200 - InterPro: IPR000150 [H]
Pfam domain/function: PF08282 Hydrolase_3 [H]
EC number: NA
Molecular weight: Translated: 32246; Mature: 32246
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYKLLALNIDGTILKNNGRLPRETKEAVAYVKRKGVYVTLMTSRNLLSARKVAKALRLD CEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHC GMLITFQGAMIGKTLDDKLFEAVIPEERTFNIVQILENFNCNIRLMHERYSLGNRKKVKK CEEEEECCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEHHHCCCCHHHHHH NLVVQTVLSSSDPFFYPTQFVDSLGDVLIDEPVAVPKIDVYFAEDEERDEAAAVLAKSVP HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCC SIDMIMHPNGKMEIVPQGVSKLTGLRRLAQHIGVSLKETVVIGDGVDDLPAIEAAGLGVA CEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHCCCEEE MGNAPVEVKRAADWVTRSNEQLGVAYMVKEHFRKQQRIEFLQKLKTKQ ECCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYYKLLALNIDGTILKNNGRLPRETKEAVAYVKRKGVYVTLMTSRNLLSARKVAKALRLD CEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHC GMLITFQGAMIGKTLDDKLFEAVIPEERTFNIVQILENFNCNIRLMHERYSLGNRKKVKK CEEEEECCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEHHHCCCCHHHHHH NLVVQTVLSSSDPFFYPTQFVDSLGDVLIDEPVAVPKIDVYFAEDEERDEAAAVLAKSVP HHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCC SIDMIMHPNGKMEIVPQGVSKLTGLRRLAQHIGVSLKETVVIGDGVDDLPAIEAAGLGVA CEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHCCCEEE MGNAPVEVKRAADWVTRSNEQLGVAYMVKEHFRKQQRIEFLQKLKTKQ ECCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 10568751; 11988534 [H]