Click here to switch to the map view.

The map label for this gene is 138894225

Identifier: 138894225

GI number: 138894225

Start: 613252

End: 613611

Strand: Direct

Name: 138894225

Synonym: GTNG_0551

Alternate gene names: NA

Gene position: 613252-613611 (Clockwise)

Preceding gene: 138894224

Following gene: 138894226

Centisome position: 17.27

GC content: 49.17

Gene sequence:

>360_bases
ATGTCTGAATCTCTTCACGCACTTGCCAGACAGCTTGAGCAGGCAATTCGGGCGAGCCAGCCATTTCAGCAATTGAAACA
GGCGTACGAAGATGTCCGTCGTGATGAAACGGCCTATCAGATGTTTGCGAATTTCCGCGACATTCAGCTTCGGCTTCACG
AAAAACAAATGCGCGGAGCAGCCATTTTGCCCGATGAAATCGAACAGGCGCAAAAGGCGATGGCACTCGCTCAACAAAAT
GCGAAACTAGCTCGCCTAATGGCGCTTGAACAACAAATGAGCATGACGATTGCCGAAGTCCAACAAATCGCGATGAAACC
GCTCGAAGAGTTGCATCGTTCGTTGATGGAAGAAAAATAG

Upstream 100 bases:

>100_bases
TCAAGGAATCATCGGCTTATGGCTGTAGCTGGAGGCATATCGCCGACCGCCGGCGCATACGTTAGAACGTGAACAATATT
GATGTAGGAGGATCCTTTTC

Downstream 100 bases:

>100_bases
GGAAGAACACCCGGTCGGGTGTTCTTTTTTTGTCCGTTTTGTCATAGTCATGAGAATGATAAGAAATGCAAAGCTGCCGC
TAGCAGATGAAGAGGCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSESLHALARQLEQAIRASQPFQQLKQAYEDVRRDETAYQMFANFRDIQLRLHEKQMRGAAILPDEIEQAQKAMALAQQN
AKLARLMALEQQMSMTIAEVQQIAMKPLEELHRSLMEEK

Sequences:

>Translated_119_residues
MSESLHALARQLEQAIRASQPFQQLKQAYEDVRRDETAYQMFANFRDIQLRLHEKQMRGAAILPDEIEQAQKAMALAQQN
AKLARLMALEQQMSMTIAEVQQIAMKPLEELHRSLMEEK
>Mature_118_residues
SESLHALARQLEQAIRASQPFQQLKQAYEDVRRDETAYQMFANFRDIQLRLHEKQMRGAAILPDEIEQAQKAMALAQQNA
KLARLMALEQQMSMTIAEVQQIAMKPLEELHRSLMEEK

Specific function: Unknown

COG id: COG3679

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0342 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y551_GEOTN (A4IKS9)

Other databases:

- EMBL:   CP000557
- RefSeq:   YP_001124678.1
- ProteinModelPortal:   A4IKS9
- SMR:   A4IKS9
- STRING:   A4IKS9
- GeneID:   4965495
- GenomeReviews:   CP000557_GR
- KEGG:   gtn:GTNG_0551
- NMPDR:   fig|420246.5.peg.526
- eggNOG:   COG3679
- HOGENOM:   HBG499075
- OMA:   RRDETAY
- ProtClustDB:   PRK13676
- BioCyc:   GTHE420246:GTNG_0551-MONOMER
- HAMAP:   MF_01526
- InterPro:   IPR010368

Pfam domain/function: PF06133 DUF964

EC number: NA

Molecular weight: Translated: 13825; Mature: 13694

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.6 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESLHALARQLEQAIRASQPFQQLKQAYEDVRRDETAYQMFANFRDIQLRLHEKQMRGA
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AILPDEIEQAQKAMALAQQNAKLARLMALEQQMSMTIAEVQQIAMKPLEELHRSLMEEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SESLHALARQLEQAIRASQPFQQLKQAYEDVRRDETAYQMFANFRDIQLRLHEKQMRGA
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AILPDEIEQAQKAMALAQQNAKLARLMALEQQMSMTIAEVQQIAMKPLEELHRSLMEEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA