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The map label for this gene is rsmI [H]

Identifier: 138893707

GI number: 138893707

Start: 40471

End: 41376

Strand: Direct

Name: rsmI [H]

Synonym: GTNG_0028

Alternate gene names: 138893707

Gene position: 40471-41376 (Clockwise)

Preceding gene: 138893706

Following gene: 138893709

Centisome position: 1.14

GC content: 50.33

Gene sequence:

>906_bases
ATGCTTTGGCAACAAAAAAGCTTTGTCGAACAAATGGGGCAAGGAACGCTGTATATCGTGCCAACGCCGATTGGCAACTT
GGAAGATATGACGTTCCGTGCGGTACGAACATTGCGGGAAGCAGATGTGATCGCCGCGGAAGACACAAGGCAGACGAAAA
AACTGTTGTCTCATTTCGACATTCATACGCCGCTTGTTAGTTATCATGAACATAATAAATATGCCAGCGGTCGGCAGCTT
GTCGAATGGCTGAAGGAAGGGAAAAACGTAGCGTTAGTGAGTGACGCGGGTATGCCGGGCATTTCCGACCCCGGATATGA
ACTTATTGTCGCCGCGTTGGCGGAACGGTGCCGCGTCGTTCCCCTCCCTGGGGCGAACGCAGCGTTAACGGCGCTTGTCG
CCTCTGGGCTACCGACCGGCCGCTTTTTGTTCGTCGGTTTTTTGGAACGAGCGAAAAAAGAGAAGCGGGAACAGTTGTTG
TCGTTAAAAACAGCAGCAGAGACGTTGGTTTTTTATGAGGCTCCTCACCGCTTAAAAGAAACGTTGGCGGCTATGTACGA
TGTGTTCGGCGAGCGGCGTGTTGCTCTTTGTCGAGAATTGACCAAACGGTTTGAGGAATTCATCCGCGGCGATTTAAGCG
AGGCCATCGCTTGGGCGGAGACAACTGACATTCGCGGTGAGTTTTGTATTGTTGTTGAAGGGGCACAGAACGGAAGTGAA
CCTGAGCGGGAGGAAGAAACGTGGTGGCAGTCGCTTTCACTGGTTGAACATGTCGATTATTATGTTAGTGAACATGGTCT
TTCCGTAAAGGAAGCAGTGAAACAGGCAGCTGGTGATCGAAAAATGTCGAAACGCGACGTCTATCAACAGTACCATCGGC
AGAAAGAGAAAAAAGAGTTTCTCTGA

Upstream 100 bases:

>100_bases
TTGCCTCCGCTTGTCGTTTATGATGAGAACAACGAATATACAGAAGAAATGAAGCGCATCTTATATGGGATTATTTCACC
GTAAAAGGGGCGGAACACGA

Downstream 100 bases:

>100_bases
GAAACCAGAGAAACTCTTTTTTTATTCGCTGTCCGTTGAGTCTTGTAAGTGCTGACGGATCTCCTGAAGCAAAATTTCTG
CTCCTTCGCGGCTTAAAATG

Product: Corrin/porphyrin methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MLWQQKSFVEQMGQGTLYIVPTPIGNLEDMTFRAVRTLREADVIAAEDTRQTKKLLSHFDIHTPLVSYHEHNKYASGRQL
VEWLKEGKNVALVSDAGMPGISDPGYELIVAALAERCRVVPLPGANAALTALVASGLPTGRFLFVGFLERAKKEKREQLL
SLKTAAETLVFYEAPHRLKETLAAMYDVFGERRVALCRELTKRFEEFIRGDLSEAIAWAETTDIRGEFCIVVEGAQNGSE
PEREEETWWQSLSLVEHVDYYVSEHGLSVKEAVKQAAGDRKMSKRDVYQQYHRQKEKKEFL

Sequences:

>Translated_301_residues
MLWQQKSFVEQMGQGTLYIVPTPIGNLEDMTFRAVRTLREADVIAAEDTRQTKKLLSHFDIHTPLVSYHEHNKYASGRQL
VEWLKEGKNVALVSDAGMPGISDPGYELIVAALAERCRVVPLPGANAALTALVASGLPTGRFLFVGFLERAKKEKREQLL
SLKTAAETLVFYEAPHRLKETLAAMYDVFGERRVALCRELTKRFEEFIRGDLSEAIAWAETTDIRGEFCIVVEGAQNGSE
PEREEETWWQSLSLVEHVDYYVSEHGLSVKEAVKQAAGDRKMSKRDVYQQYHRQKEKKEFL
>Mature_301_residues
MLWQQKSFVEQMGQGTLYIVPTPIGNLEDMTFRAVRTLREADVIAAEDTRQTKKLLSHFDIHTPLVSYHEHNKYASGRQL
VEWLKEGKNVALVSDAGMPGISDPGYELIVAALAERCRVVPLPGANAALTALVASGLPTGRFLFVGFLERAKKEKREQLL
SLKTAAETLVFYEAPHRLKETLAAMYDVFGERRVALCRELTKRFEEFIRGDLSEAIAWAETTDIRGEFCIVVEGAQNGSE
PEREEETWWQSLSLVEHVDYYVSEHGLSVKEAVKQAAGDRKMSKRDVYQQYHRQKEKKEFL

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=224, Percent_Identity=48.6607142857143, Blast_Score=206, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 34193; Mature: 34193

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWQQKSFVEQMGQGTLYIVPTPIGNLEDMTFRAVRTLREADVIAAEDTRQTKKLLSHFD
CCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
IHTPLVSYHEHNKYASGRQLVEWLKEGKNVALVSDAGMPGISDPGYELIVAALAERCRVV
CCCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCEEE
PLPGANAALTALVASGLPTGRFLFVGFLERAKKEKREQLLSLKTAAETLVFYEAPHRLKE
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TLAAMYDVFGERRVALCRELTKRFEEFIRGDLSEAIAWAETTDIRGEFCIVVEGAQNGSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
PEREEETWWQSLSLVEHVDYYVSEHGLSVKEAVKQAAGDRKMSKRDVYQQYHRQKEKKEF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
L
C
>Mature Secondary Structure
MLWQQKSFVEQMGQGTLYIVPTPIGNLEDMTFRAVRTLREADVIAAEDTRQTKKLLSHFD
CCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
IHTPLVSYHEHNKYASGRQLVEWLKEGKNVALVSDAGMPGISDPGYELIVAALAERCRVV
CCCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCEEE
PLPGANAALTALVASGLPTGRFLFVGFLERAKKEKREQLLSLKTAAETLVFYEAPHRLKE
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TLAAMYDVFGERRVALCRELTKRFEEFIRGDLSEAIAWAETTDIRGEFCIVVEGAQNGSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
PEREEETWWQSLSLVEHVDYYVSEHGLSVKEAVKQAAGDRKMSKRDVYQQYHRQKEKKEF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]