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The map label for this gene is yabB [H]

Identifier: 138893706

GI number: 138893706

Start: 39705

End: 40454

Strand: Direct

Name: yabB [H]

Synonym: GTNG_0027

Alternate gene names: 138893706

Gene position: 39705-40454 (Clockwise)

Preceding gene: 138893705

Following gene: 138893707

Centisome position: 1.12

GC content: 46.13

Gene sequence:

>750_bases
ATGGTGGAATTGTACGGGGATGAACGACTTGATTATTTGTTCAATGAGGAGCTCCGCATCATTCAGAGCCCATCTGTGTT
TTCCTTTTCCCTTGATGCGGTGCTGCTCGCCCATTTTGCCTATTTGCCCATTCAAAAAGGGCAAATCGTCGATTTATGCA
CGGGCAATGGGGTGATCCCATTGTTGCTGAGCCAACGGACAAAAGGAACGATTATCGGTATTGAAATTCAGGAACGACTT
TGCGACATGGCGAGGCGAAGCATACAATATAACGGACTAGAAGAACAAATTGAGATTATACACGGCGATATTAAAGAGGC
GCCGCAGCAAATCGGTTACAGCCGATACGATGTCGTTACGTGCAATCCTCCGTATTTTCCAACTGCCGGCCAGGATGAGC
TGAGCAAAAATGAGCACTTGGCCATCGCCCGCCACGAAATTTATTGTACATTAGAAGATGCTGTTCGCGTCAGCAGCCAA
TTGTTGAAGCAAGGAGGAAAGGCGGCGTTCGTTCACCGGCCGGGGCGGCTGCTTGATATTGTAATGCTTATGCGCCAATA
CCGGCTTGAGCCGAAACGGCTCCGTTTTGTCTATCCAAAAGCAGGAAAAGAGGCAAATATGATTTTAATTGAAGGAATGA
AAGATGCCAGTCCAGATTTAAAAGTGTTGCCTCCGCTTGTCGTTTATGATGAGAACAACGAATATACAGAAGAAATGAAG
CGCATCTTATATGGGATTATTTCACCGTAA

Upstream 100 bases:

>100_bases
CGATTGTTTGTTTTGCTTATCGTTTTTAAACAAAAAATAAAGATAGTGCAACCCTTTCCGCTTCGGAAAGGTTATTTTTT
TCAATGGAGGATCGTGTGTG

Downstream 100 bases:

>100_bases
AAGGGGCGGAACACGAATGCTTTGGCAACAAAAAAGCTTTGTCGAACAAATGGGGCAAGGAACGCTGTATATCGTGCCAA
CGCCGATTGGCAACTTGGAA

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MVELYGDERLDYLFNEELRIIQSPSVFSFSLDAVLLAHFAYLPIQKGQIVDLCTGNGVIPLLLSQRTKGTIIGIEIQERL
CDMARRSIQYNGLEEQIEIIHGDIKEAPQQIGYSRYDVVTCNPPYFPTAGQDELSKNEHLAIARHEIYCTLEDAVRVSSQ
LLKQGGKAAFVHRPGRLLDIVMLMRQYRLEPKRLRFVYPKAGKEANMILIEGMKDASPDLKVLPPLVVYDENNEYTEEMK
RILYGIISP

Sequences:

>Translated_249_residues
MVELYGDERLDYLFNEELRIIQSPSVFSFSLDAVLLAHFAYLPIQKGQIVDLCTGNGVIPLLLSQRTKGTIIGIEIQERL
CDMARRSIQYNGLEEQIEIIHGDIKEAPQQIGYSRYDVVTCNPPYFPTAGQDELSKNEHLAIARHEIYCTLEDAVRVSSQ
LLKQGGKAAFVHRPGRLLDIVMLMRQYRLEPKRLRFVYPKAGKEANMILIEGMKDASPDLKVLPPLVVYDENNEYTEEMK
RILYGIISP
>Mature_249_residues
MVELYGDERLDYLFNEELRIIQSPSVFSFSLDAVLLAHFAYLPIQKGQIVDLCTGNGVIPLLLSQRTKGTIIGIEIQERL
CDMARRSIQYNGLEEQIEIIHGDIKEAPQQIGYSRYDVVTCNPPYFPTAGQDELSKNEHLAIARHEIYCTLEDAVRVSSQ
LLKQGGKAAFVHRPGRLLDIVMLMRQYRLEPKRLRFVYPKAGKEANMILIEGMKDASPDLKVLPPLVVYDENNEYTEEMK
RILYGIISP

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 28401; Mature: 28401

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELYGDERLDYLFNEELRIIQSPSVFSFSLDAVLLAHFAYLPIQKGQIVDLCTGNGVIP
CEEECCCCHHHHHHCCCEEEEECCCEEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCEEE
LLLSQRTKGTIIGIEIQERLCDMARRSIQYNGLEEQIEIIHGDIKEAPQQIGYSRYDVVT
EEECCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHCCCCEEEEEE
CNPPYFPTAGQDELSKNEHLAIARHEIYCTLEDAVRVSSQLLKQGGKAAFVHRPGRLLDI
CCCCCCCCCCCHHCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEECCCHHHHH
VMLMRQYRLEPKRLRFVYPKAGKEANMILIEGMKDASPDLKVLPPLVVYDENNEYTEEMK
HHHHHHHCCCHHHEEEECCCCCCCCCEEEEECCCCCCCCCEECCCEEEEECCCHHHHHHH
RILYGIISP
HHHHHHCCC
>Mature Secondary Structure
MVELYGDERLDYLFNEELRIIQSPSVFSFSLDAVLLAHFAYLPIQKGQIVDLCTGNGVIP
CEEECCCCHHHHHHCCCEEEEECCCEEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCEEE
LLLSQRTKGTIIGIEIQERLCDMARRSIQYNGLEEQIEIIHGDIKEAPQQIGYSRYDVVT
EEECCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHCCCCEEEEEE
CNPPYFPTAGQDELSKNEHLAIARHEIYCTLEDAVRVSSQLLKQGGKAAFVHRPGRLLDI
CCCCCCCCCCCHHCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHCCCCEEEEECCCHHHHH
VMLMRQYRLEPKRLRFVYPKAGKEANMILIEGMKDASPDLKVLPPLVVYDENNEYTEEMK
HHHHHHHCCCHHHEEEECCCCCCCCCEEEEECCCCCCCCCEECCCEEEEECCCHHHHHHH
RILYGIISP
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]