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The map label for this gene is ybaB [C]

Identifier: 138893696

GI number: 138893696

Start: 27390

End: 27716

Strand: Direct

Name: ybaB [C]

Synonym: GTNG_0017

Alternate gene names: 138893696

Gene position: 27390-27716 (Clockwise)

Preceding gene: 138893695

Following gene: 138893697

Centisome position: 0.77

GC content: 40.37

Gene sequence:

>327_bases
ATGATGCGTGGCGGAATGGGAAATATGCAAAAAATGTTAAAGCAAATGCAGAAAATGCAAAAAGAAATGCAAAAGGCACA
AGAAGAGTTAGCGGAAAAAACAGTAGAAGGGACGGCTGGGGGAGGTATGGTGACAGTCGTCGCCAATGGCCATAAACAAA
TTTTGGAGGTCAAAATTAAGGAAGAAGTGGTAGACCCTGATGATATTGAAATGTTACAAGATTTAATTTTAGCGGCAACA
AACGATGCACTAAAAAAAGTGGATGAACTAGCTAACGACATGATGGGGCAGTTTACCAAAGGGTTAAACATTCCAGGACT
GTTCTAG

Upstream 100 bases:

>100_bases
GAAAAAAGTGAGGAAGAACCGTTGATTGCCGAGGCGAAACGGCTGTTTGGTGAAGAACTGATCGAAATTAAAGAATAAAC
GATTGAAGGAGGATTCCAAA

Downstream 100 bases:

>100_bases
GGGGAAACCATGCATTATCCAGAGCCAATATCGAAGTTAATTGACAGTTTTATGAAACTGCCCGGGATTGGTCCAAAAAC
GGCCGCCCGTCTTGCGTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MMRGGMGNMQKMLKQMQKMQKEMQKAQEELAEKTVEGTAGGGMVTVVANGHKQILEVKIKEEVVDPDDIEMLQDLILAAT
NDALKKVDELANDMMGQFTKGLNIPGLF

Sequences:

>Translated_108_residues
MMRGGMGNMQKMLKQMQKMQKEMQKAQEELAEKTVEGTAGGGMVTVVANGHKQILEVKIKEEVVDPDDIEMLQDLILAAT
NDALKKVDELANDMMGQFTKGLNIPGLF
>Mature_108_residues
MMRGGMGNMQKMLKQMQKMQKEMQKAQEELAEKTVEGTAGGGMVTVVANGHKQILEVKIKEEVVDPDDIEMLQDLILAAT
NDALKKVDELANDMMGQFTKGLNIPGLF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=106, Percent_Identity=40.5660377358491, Blast_Score=80, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y017_GEOTN (A4IJA0)

Other databases:

- EMBL:   CP000557
- RefSeq:   YP_001124149.1
- ProteinModelPortal:   A4IJA0
- SMR:   A4IJA0
- STRING:   A4IJA0
- GeneID:   4965143
- GenomeReviews:   CP000557_GR
- KEGG:   gtn:GTNG_0017
- NMPDR:   fig|420246.5.peg.17
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- ProtClustDB:   PRK00153
- BioCyc:   GTHE420246:GTNG_0017-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11925; Mature: 11925

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
11.1 %Met     (Translated Protein)
11.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
11.1 %Met     (Mature Protein)
11.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRGGMGNMQKMLKQMQKMQKEMQKAQEELAEKTVEGTAGGGMVTVVANGHKQILEVKIK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHH
EEVVDPDDIEMLQDLILAATNDALKKVDELANDMMGQFTKGLNIPGLF
HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMRGGMGNMQKMLKQMQKMQKEMQKAQEELAEKTVEGTAGGGMVTVVANGHKQILEVKIK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHH
EEVVDPDDIEMLQDLILAATNDALKKVDELANDMMGQFTKGLNIPGLF
HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA