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The map label for this gene is recR [H]

Identifier: 138893697

GI number: 138893697

Start: 27726

End: 28322

Strand: Direct

Name: recR [H]

Synonym: GTNG_0018

Alternate gene names: 138893697

Gene position: 27726-28322 (Clockwise)

Preceding gene: 138893696

Following gene: 138893698

Centisome position: 0.78

GC content: 47.91

Gene sequence:

>597_bases
ATGCATTATCCAGAGCCAATATCGAAGTTAATTGACAGTTTTATGAAACTGCCCGGGATTGGTCCAAAAACGGCCGCCCG
TCTTGCGTTCCATGTGCTGGCAATGAAAGAAGATACCGTGCTCGAGTTTGCCAAAGCGCTGGTCGATGTGAAGCGTCATA
TTCATTATTGTACGATTTGCGGACATATTACAGATACAGACCCTTGTTACATCTGCAAAGATGAACGGCGCGATCGGACG
ATGATTTGCGTCGTCCAAGACCCAAAAGATGTCATCGCTATGGAGAAGATGAAGGAATATAACGGTCTATATCATGTGTT
GCATGGAGCCATCTCCCCGATGGAAGGGATCGGACCGGAAGACATTAAAATTGCGGAACTGCTAGCGAGATTGCAGGACG
AAACGATCCAAGAAGTGATTTTAGCGACCGACCCAAACATTGAAGGGGAGGCGACGGCCATGTATTTATCGCGTCTGTTA
AAACCAACAGGGATCAAAATTACCCGCATCGCCCATGGGTTGCCAGTTGGTGGTGATTTGGAATATGCGGACGAAGTGAC
GTTATCAAAAGCGTTGGAAGGACGCCGCGAGCTGTAG

Upstream 100 bases:

>100_bases
AACAAACGATGCACTAAAAAAAGTGGATGAACTAGCTAACGACATGATGGGGCAGTTTACCAAAGGGTTAAACATTCCAG
GACTGTTCTAGGGGGAAACC

Downstream 100 bases:

>100_bases
AGAGAAAGAAGGTGGGGATCGGTTTGTTATGGCGGCGGAAGGGGAAACTAAAGAGACAATTTGATGAAAAGCTAATCGCT
GAGCTACAAAAAGCAAGAAC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MHYPEPISKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTICGHITDTDPCYICKDERRDRT
MICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDIKIAELLARLQDETIQEVILATDPNIEGEATAMYLSRLL
KPTGIKITRIAHGLPVGGDLEYADEVTLSKALEGRREL

Sequences:

>Translated_198_residues
MHYPEPISKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTICGHITDTDPCYICKDERRDRT
MICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDIKIAELLARLQDETIQEVILATDPNIEGEATAMYLSRLL
KPTGIKITRIAHGLPVGGDLEYADEVTLSKALEGRREL
>Mature_198_residues
MHYPEPISKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTICGHITDTDPCYICKDERRDRT
MICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPEDIKIAELLARLQDETIQEVILATDPNIEGEATAMYLSRLL
KPTGIKITRIAHGLPVGGDLEYADEVTLSKALEGRREL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=43.0051813471503, Blast_Score=171, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 22139; Mature: 22139

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYPEPISKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTIC
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEE
GHITDTDPCYICKDERRDRTMICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPE
CCCCCCCCEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DIKIAELLARLQDETIQEVILATDPNIEGEATAMYLSRLLKPTGIKITRIAHGLPVGGDL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCC
EYADEVTLSKALEGRREL
CHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHYPEPISKLIDSFMKLPGIGPKTAARLAFHVLAMKEDTVLEFAKALVDVKRHIHYCTIC
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEE
GHITDTDPCYICKDERRDRTMICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMEGIGPE
CCCCCCCCEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DIKIAELLARLQDETIQEVILATDPNIEGEATAMYLSRLLKPTGIKITRIAHGLPVGGDL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCC
EYADEVTLSKALEGRREL
CHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA