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The map label for this gene is 13507978

Identifier: 13507978

GI number: 13507978

Start: 291667

End: 292335

Strand: Direct

Name: 13507978

Synonym: MPN239

Alternate gene names: NA

Gene position: 291667-292335 (Clockwise)

Preceding gene: 13507977

Following gene: 13507979

Centisome position: 35.73

GC content: 39.16

Gene sequence:

>669_bases
ATGATTTCAGCGAAAGAGCAAGCTAAAAAAGGTCAAATAATTTACCGTTACATTCTCCTTAAAATTCAAAGCTTTAAATG
GCCTGCTGGCACCCGCATCTTCTCTGAACGCCAGCTCGAAATTCGTTTCGCTTCATCTAGAAGTCTCATTCGTACTATCC
TCAATACCCTCTTAGGTAAAGATCTAATTCGCCACACTAAAGGTAATGCTGGTTACTTTGTCGCTAAGAATGCTGGTTTT
AGTTTCTTTCATAAAACCCAGGACAACAAATTGCCCAAGTGAGCTAAGCTCTCAACCTTAATGAAGAACCACCTACGCGA
AGTTGACCGTGATGTTTTCAGCTCAATTGACAGTGGCGTTGACTTTGGTAACTTTAAGGGTTTGGAAGCCAAGTTATTTG
ATGAAAACAAGAAGAATTTTTTAAACCTTAGCTTCTTTGGCAAGGATGATGTGCTCCAAATTTTTAGCGAGCAAAACCTC
CAGGAACAATTCTTTAAGGACTTTGCTTACAACGGCATTGTGGTAGAGCGCAAAAGCTCCTTAATCTGTGTGGATGATGA
GACTAAGAACTTACTGATCTACGACCTCTTTTATGATGACAACAATAAGTTCATAGTAGCAATGCGCTCTGAATATTTAA
ACCCCCGCATCAAAATTATTAATGCTTAA

Upstream 100 bases:

>100_bases
GTTGAACGAATTCAAAAGCTAATTATAGGTCAAGTTATGCAAAGAACCCACAATCGCGCCAATCCCCAGCAAGTTTTTAT
AATTGTTGAAAAGTTGCTTC

Downstream 100 bases:

>100_bases
AGTAAAGTCAGATTTTTTAACTAAAGATCAGGTTATTTACGATGTAGCGATAGTGGGTGCTGGGCCAGCTGGCATAGCAG
CGGGTATTTATGGCAAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MISAKEQAKKGQIIYRYILLKIQSFKWPAGTRIFSERQLEIRFASSRSLIRTILNTLLGKDLIRHTKGNAGYFVAKNAGF
SFFHKTQDNKLPKWAKLSTLMKNHLREVDRDVFSSIDSGVDFGNFKGLEAKLFDENKKNFLNLSFFGKDDVLQIFSEQNL
QEQFFKDFAYNGIVVERKSSLICVDDETKNLLIYDLFYDDNNKFIVAMRSEYLNPRIKIINA

Sequences:

>Translated_222_residues
MISAKEQAKKGQIIYRYILLKIQSFKWPAGTRIFSERQLEIRFASSRSLIRTILNTLLGKDLIRHTKGNAGYFVAKNAGF
SFFHKTQDNKLPK*AKLSTLMKNHLREVDRDVFSSIDSGVDFGNFKGLEAKLFDENKKNFLNLSFFGKDDVLQIFSEQNL
QEQFFKDFAYNGIVVERKSSLICVDDETKNLLIYDLFYDDNNKFIVAMRSEYLNPRIKIINA
>Mature_222_residues
MISAKEQAKKGQIIYRYILLKIQSFKWPAGTRIFSERQLEIRFASSRSLIRTILNTLLGKDLIRHTKGNAGYFVAKNAGF
SFFHKTQDNKLPK*AKLSTLMKNHLREVDRDVFSSIDSGVDFGNFKGLEAKLFDENKKNFLNLSFFGKDDVLQIFSEQNL
QEQFFKDFAYNGIVVERKSSLICVDDETKNLLIYDLFYDDNNKFIVAMRSEYLNPRIKIINA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25646; Mature: 25646

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISAKEQAKKGQIIYRYILLKIQSFKWPAGTRIFSERQLEIRFASSRSLIRTILNTLLGK
CCCCHHHHHCCCEEEEHHHHHHHCCCCCCCCEEECCCEEEEEECCCHHHHHHHHHHHHHH
DLIRHTKGNAGYFVAKNAGFSFFHKTQDNKLPKAKLSTLMKNHLREVDRDVFSSIDSGVD
HHHHHCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FGNFKGLEAKLFDENKKNFLNLSFFGKDDVLQIFSEQNLQEQFFKDFAYNGIVVERKSSL
CCCCCCCEEEEECCCCCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCE
ICVDDETKNLLIYDLFYDDNNKFIVAMRSEYLNPRIKIINA
EEEECCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEEEC
>Mature Secondary Structure
MISAKEQAKKGQIIYRYILLKIQSFKWPAGTRIFSERQLEIRFASSRSLIRTILNTLLGK
CCCCHHHHHCCCEEEEHHHHHHHCCCCCCCCEEECCCEEEEEECCCHHHHHHHHHHHHHH
DLIRHTKGNAGYFVAKNAGFSFFHKTQDNKLPKAKLSTLMKNHLREVDRDVFSSIDSGVD
HHHHHCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FGNFKGLEAKLFDENKKNFLNLSFFGKDDVLQIFSEQNLQEQFFKDFAYNGIVVERKSSL
CCCCCCCEEEEECCCCCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCE
ICVDDETKNLLIYDLFYDDNNKFIVAMRSEYLNPRIKIINA
EEEECCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]