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The map label for this gene is amiD [H]

Identifier: 13507955

GI number: 13507955

Start: 267072

End: 268202

Strand: Direct

Name: amiD [H]

Synonym: MPN216

Alternate gene names: 13507955

Gene position: 267072-268202 (Clockwise)

Preceding gene: 13507954

Following gene: 13507956

Centisome position: 32.71

GC content: 43.68

Gene sequence:

>1131_bases
ATGGATAAGCACCAAAAATTTGACCAAAGCCTGTTTCAACGGGTAGACATTAATGTCTTAAAACGCTCTGACCAGTTGAT
TGGCAAACCAACCACTAACTTTGTCGAAATTATGAAGCGGTTGTTCCAAAATAAGTGAGCAATCCTCTTCTTTTTACTGA
TTGTGCTAATTATTTTGTTAGCCATCATTGTACCCTTAGCATCACCTTATTCAGCCGTTACTCCAGTATCGAACAACGCT
TTGGCACAGAACCTACCACCACGATACCTCTGGAACGGCGCGGGTGACATTCAAGTAGAGAAAATTACGGCACGCTCGAT
TGCTGAAGTGGCCCAATCAAGTGGTGTTTTGGTAGGGAAATTACCGGAGGCAAGTAGCAATCCACTCGCTACTAACGTTA
AGTACAACATTGCGCCTTACCAACTAGCAGAGCTGAAAAACTACTATCCATTATTAGGCACTAACGGTTTAGGGGTTGAT
ATTTGAACTTTACTGTGAGCCAGTATGGCCAAGTCACTCTGAATTGCGATTGTGGTAGCCTTAGTTTCAATGGTCTTCGG
CACCATTTACGGCGCGATTGCTGGGAGCTTTGTTGGACGCGCTGCTGACAACATTATGAGCCGGATCATTGAAATTATTG
ATTTGGTTCCTTCAATTCTCTGGATCATTGTCTTGGGAGCAACATTCCGCTTTGGTGGGGTAAAACAATTTGATGACAGT
GTGGTGATCTTTACCTTAATCTTTGTCTTTTGGACCTGACCCGCTGCTACCACAAGGATCTACATCTTAAAGAATAAGGA
TACGGAGTACATCCAAGCAGCGCGTACCTTAGGAGCAAAACAAATTCGCATTATTTTTGTCCACATGCTACCAGTTGTAA
CTGGTCGTTTAGCAGTCGTCTTTGTGAGTTTGATTCCCGCTGTGATTGGTTATGAAGCATCACTGGTTTTCTTAGGGCTT
AAACCTGCTACCGAAGTGGGACTTGGTGCTTTATTAAACCAGGTCACCAGTAGTGGTAACATAGCACTGATTACCAGCTC
AATTGTGAGCTTTGCAATTCTCACCGTTTCGACCCGCGTGTTTGCTAACGCTTTAAATGACGCAATTGACCCACGGGTAA
TAAGGAGGTAA

Upstream 100 bases:

>100_bases
ACCATTAGCTTAACTGAACAGCAAAAAACCACCCTTAAAATTGAACCAACTGCTAACTTTGTTTTGTTAGGAACTAAATG
TTTAAAGATTATTACGATCC

Downstream 100 bases:

>100_bases
TATGGCACTAAAAGCAACTAATTTTTTTACAGAACCAGAGTACAAACTGCAGGATGATTTGATCTTAGATATCCGTGATC
TTCACGTGAGTTTTAAGGTT

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MDKHQKFDQSLFQRVDINVLKRSDQLIGKPTTNFVEIMKRLFQNKWAILFFLLIVLIILLAIIVPLASPYSAVTPVSNNA
LAQNLPPRYLWNGAGDIQVEKITARSIAEVAQSSGVLVGKLPEASSNPLATNVKYNIAPYQLAELKNYYPLLGTNGLGVD
IWTLLWASMAKSLWIAIVVALVSMVFGTIYGAIAGSFVGRAADNIMSRIIEIIDLVPSILWIIVLGATFRFGGVKQFDDS
VVIFTLIFVFWTWPAATTRIYILKNKDTEYIQAARTLGAKQIRIIFVHMLPVVTGRLAVVFVSLIPAVIGYEASLVFLGL
KPATEVGLGALLNQVTSSGNIALITSSIVSFAILTVSTRVFANALNDAIDPRVIRR

Sequences:

>Translated_376_residues
MDKHQKFDQSLFQRVDINVLKRSDQLIGKPTTNFVEIMKRLFQNK*AILFFLLIVLIILLAIIVPLASPYSAVTPVSNNA
LAQNLPPRYLWNGAGDIQVEKITARSIAEVAQSSGVLVGKLPEASSNPLATNVKYNIAPYQLAELKNYYPLLGTNGLGVD
I*TLL*ASMAKSL*IAIVVALVSMVFGTIYGAIAGSFVGRAADNIMSRIIEIIDLVPSILWIIVLGATFRFGGVKQFDDS
VVIFTLIFVFWT*PAATTRIYILKNKDTEYIQAARTLGAKQIRIIFVHMLPVVTGRLAVVFVSLIPAVIGYEASLVFLGL
KPATEVGLGALLNQVTSSGNIALITSSIVSFAILTVSTRVFANALNDAIDPRVIRR
>Mature_376_residues
MDKHQKFDQSLFQRVDINVLKRSDQLIGKPTTNFVEIMKRLFQNK*AILFFLLIVLIILLAIIVPLASPYSAVTPVSNNA
LAQNLPPRYLWNGAGDIQVEKITARSIAEVAQSSGVLVGKLPEASSNPLATNVKYNIAPYQLAELKNYYPLLGTNGLGVD
I*TLL*ASMAKSL*IAIVVALVSMVFGTIYGAIAGSFVGRAADNIMSRIIEIIDLVPSILWIIVLGATFRFGGVKQFDDS
VVIFTLIFVFWT*PAATTRIYILKNKDTEYIQAARTLGAKQIRIIFVHMLPVVTGRLAVVFVSLIPAVIGYEASLVFLGL
KPATEVGLGALLNQVTSSGNIALITSSIVSFAILTVSTRVFANALNDAIDPRVIRR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=249, Percent_Identity=30.9236947791165, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40213; Mature: 40213

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKHQKFDQSLFQRVDINVLKRSDQLIGKPTTNFVEIMKRLFQNKAILFFLLIVLIILLA
CCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
IIVPLASPYSAVTPVSNNALAQNLPPRYLWNGAGDIQVEKITARSIAEVAQSSGVLVGKL
HHHHCCCCCCCCCCCCCCCHHHCCCCCCEECCCCCEEEEHHHHHHHHHHHHHCCEEEEEC
PEASSNPLATNVKYNIAPYQLAELKNYYPLLGTNGLGVDITLLASMAKSLIAIVVALVSM
CCCCCCCCEECEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VFGTIYGAIAGSFVGRAADNIMSRIIEIIDLVPSILWIIVLGATFRFGGVKQFDDSVVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
TLIFVFWTPAATTRIYILKNKDTEYIQAARTLGAKQIRIIFVHMLPVVTGRLAVVFVSLI
HHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAVIGYEASLVFLGLKPATEVGLGALLNQVTSSGNIALITSSIVSFAILTVSTRVFANAL
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
NDAIDPRVIRR
HHCCCCHHHCC
>Mature Secondary Structure
MDKHQKFDQSLFQRVDINVLKRSDQLIGKPTTNFVEIMKRLFQNKAILFFLLIVLIILLA
CCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
IIVPLASPYSAVTPVSNNALAQNLPPRYLWNGAGDIQVEKITARSIAEVAQSSGVLVGKL
HHHHCCCCCCCCCCCCCCCHHHCCCCCCEECCCCCEEEEHHHHHHHHHHHHHCCEEEEEC
PEASSNPLATNVKYNIAPYQLAELKNYYPLLGTNGLGVDITLLASMAKSLIAIVVALVSM
CCCCCCCCEECEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VFGTIYGAIAGSFVGRAADNIMSRIIEIIDLVPSILWIIVLGATFRFGGVKQFDDSVVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
TLIFVFWTPAATTRIYILKNKDTEYIQAARTLGAKQIRIIFVHMLPVVTGRLAVVFVSLI
HHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAVIGYEASLVFLGLKPATEVGLGALLNQVTSSGNIALITSSIVSFAILTVSTRVFANAL
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
NDAIDPRVIRR
HHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]