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The map label for this gene is oppB [H]

Identifier: 13507954

GI number: 13507954

Start: 265910

End: 267079

Strand: Direct

Name: oppB [H]

Synonym: MPN215

Alternate gene names: 13507954

Gene position: 265910-267079 (Clockwise)

Preceding gene: 13507952

Following gene: 13507955

Centisome position: 32.57

GC content: 40.17

Gene sequence:

>1170_bases
ATGTTTATCGTGATGACCATTGTCTTCTTTTTGGTTAACTCCACAGGTCAAACGCCCTTATCAGCAACCTCTTCTAAGGA
TTTGGAGGCTGTCAAAACACAACTAGATGCCTTTGGTTTTAACGATCCGTTAATTGTGCGATATGGTCGTTACTGACAAA
CCCTCTTTTCAGGTAGTTTGGGTACTTATTACAGCTCCCCGAACCAAACAATTGACCAAATTGTCTTTGGTCGGGTACCT
AACACCCTTTACGTTGTTTTAATTTCTTTCTTTATCGGCTCTTTGTTGGGCATTATCTTCGGGATGATTTCCGGATTATT
CCGTGGCAAGTTAATTGATGCGGTAATTAACGTGCTCGTTGTTTTATTTGTTTCGATTCCTTCCTTTGTGGTTGGTTTAG
GTTTACTTAAGGCAGCTGGTTTGTTCCGTTTACCACCGCGCTTTATTAACTTCGATGATGCTAACTTTAACTTTGGTAAC
TTCTTGTTAGCCTCCATTATTCCTATTTTATCCTTGGTATTTTACACCTCAGCGGCCTTTACTTATCGGGTACGGAATGA
GGTCGTGGAAGTAATGAACCAGGACTACATAAAAACAGCACGTAGTAAAGGTTTGAGTACTTTTGCTGTAGCGCTTTACC
ACATCTTCCGTAACTCAATTATTCCTTCTGTACCTTTATTTGTCTTTGGGATCTCTGGTGCCTTTTCGGGTGGTTTTATT
ATTGAATCCTTATTTGGTGTTCAGGGGGTATCACGGATCTTAATTGACTCGGTGCAAAGTAACGAAACTAACCTCGTGAT
GTTTAACATTATGTTCATCCAGGGGATTCCCTTACTAGCAAGTGTCTTCATTGAGTTGATTTATGTCCTAGTGGATCCTA
GGATTCGGATTGCTAGTGCCGGTGGGGTGAGTCTGTGAACTAAGCTTAAGTTTGTTTATTTACGCCAAGCTTGATTGCGT
AAGTGAAGACGGATTAACCACACTAATTCCCACAATGTGTTGTTCAATTCGCCCCAACACCGCCAGCTGTTAGAGCTCAA
AGCAATTGATTACAAGCACAATACCATTAGCTTAACTGAACAGCAAAAAACCACCCTTAAAATTGAACCAACTGCTAACT
TTGTTTTGTTAGGAACTAAATGTTTAAAGATTATTACGATCCATGGATAA

Upstream 100 bases:

>100_bases
CATGCTGAGGGACCTGAGAACCAGGTTCCTTTTTCTTTTTTATTAGTATTCGAAAGTGTTCAAGTATATTCTTAAACGTT
TGGGTTTGGCAGTGTTAGCG

Downstream 100 bases:

>100_bases
GCACCAAAAATTTGACCAAAGCCTGTTTCAACGGGTAGACATTAATGTCTTAAAACGCTCTGACCAGTTGATTGGCAAAC
CAACCACTAACTTTGTCGAA

Product: peptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MFIVMTIVFFLVNSTGQTPLSATSSKDLEAVKTQLDAFGFNDPLIVRYGRYWQTLFSGSLGTYYSSPNQTIDQIVFGRVP
NTLYVVLISFFIGSLLGIIFGMISGLFRGKLIDAVINVLVVLFVSIPSFVVGLGLLKAAGLFRLPPRFINFDDANFNFGN
FLLASIIPILSLVFYTSAAFTYRVRNEVVEVMNQDYIKTARSKGLSTFAVALYHIFRNSIIPSVPLFVFGISGAFSGGFI
IESLFGVQGVSRILIDSVQSNETNLVMFNIMFIQGIPLLASVFIELIYVLVDPRIRIASAGGVSLWTKLKFVYLRQAWLR
KWRRINHTNSHNVLFNSPQHRQLLELKAIDYKHNTISLTEQQKTTLKIEPTANFVLLGTKCLKIITIHG

Sequences:

>Translated_389_residues
MFIVMTIVFFLVNSTGQTPLSATSSKDLEAVKTQLDAFGFNDPLIVRYGRY*QTLFSGSLGTYYSSPNQTIDQIVFGRVP
NTLYVVLISFFIGSLLGIIFGMISGLFRGKLIDAVINVLVVLFVSIPSFVVGLGLLKAAGLFRLPPRFINFDDANFNFGN
FLLASIIPILSLVFYTSAAFTYRVRNEVVEVMNQDYIKTARSKGLSTFAVALYHIFRNSIIPSVPLFVFGISGAFSGGFI
IESLFGVQGVSRILIDSVQSNETNLVMFNIMFIQGIPLLASVFIELIYVLVDPRIRIASAGGVSL*TKLKFVYLRQA*LR
K*RRINHTNSHNVLFNSPQHRQLLELKAIDYKHNTISLTEQQKTTLKIEPTANFVLLGTKCLKIITIHG
>Mature_389_residues
MFIVMTIVFFLVNSTGQTPLSATSSKDLEAVKTQLDAFGFNDPLIVRYGRY*QTLFSGSLGTYYSSPNQTIDQIVFGRVP
NTLYVVLISFFIGSLLGIIFGMISGLFRGKLIDAVINVLVVLFVSIPSFVVGLGLLKAAGLFRLPPRFINFDDANFNFGN
FLLASIIPILSLVFYTSAAFTYRVRNEVVEVMNQDYIKTARSKGLSTFAVALYHIFRNSIIPSVPLFVFGISGAFSGGFI
IESLFGVQGVSRILIDSVQSNETNLVMFNIMFIQGIPLLASVFIELIYVLVDPRIRIASAGGVSL*TKLKFVYLRQA*LR
K*RRINHTNSHNVLFNSPQHRQLLELKAIDYKHNTISLTEQQKTTLKIEPTANFVLLGTKCLKIITIHG

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=298, Percent_Identity=24.496644295302, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787053, Length=300, Percent_Identity=25.6666666666667, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789965, Length=285, Percent_Identity=25.9649122807018, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1787761, Length=270, Percent_Identity=26.6666666666667, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787550, Length=237, Percent_Identity=24.4725738396624, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1789888, Length=270, Percent_Identity=22.2222222222222, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788504, Length=281, Percent_Identity=25.6227758007117, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 42722; Mature: 42722

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIVMTIVFFLVNSTGQTPLSATSSKDLEAVKTQLDAFGFNDPLIVRYGRYQTLFSGSLG
CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEECCCCCC
TYYSSPNQTIDQIVFGRVPNTLYVVLISFFIGSLLGIIFGMISGLFRGKLIDAVINVLVV
CEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVSIPSFVVGLGLLKAAGLFRLPPRFINFDDANFNFGNFLLASIIPILSLVFYTSAAFT
HHHHHHHHHHHHHHHHHCCHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YRVRNEVVEVMNQDYIKTARSKGLSTFAVALYHIFRNSIIPSVPLFVFGISGAFSGGFII
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCCHHHH
ESLFGVQGVSRILIDSVQSNETNLVMFNIMFIQGIPLLASVFIELIYVLVDPRIRIASAG
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCEEEEECC
GVSLTKLKFVYLRQALRKRRINHTNSHNVLFNSPQHRQLLELKAIDYKHNTISLTEQQKT
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCCEEEEECCCCC
TLKIEPTANFVLLGTKCLKIITIHG
EEEEECCCCEEEEECEEEEEEEECC
>Mature Secondary Structure
MFIVMTIVFFLVNSTGQTPLSATSSKDLEAVKTQLDAFGFNDPLIVRYGRYQTLFSGSLG
CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEECCCCCC
TYYSSPNQTIDQIVFGRVPNTLYVVLISFFIGSLLGIIFGMISGLFRGKLIDAVINVLVV
CEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVSIPSFVVGLGLLKAAGLFRLPPRFINFDDANFNFGNFLLASIIPILSLVFYTSAAFT
HHHHHHHHHHHHHHHHHCCHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YRVRNEVVEVMNQDYIKTARSKGLSTFAVALYHIFRNSIIPSVPLFVFGISGAFSGGFII
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCCHHHH
ESLFGVQGVSRILIDSVQSNETNLVMFNIMFIQGIPLLASVFIELIYVLVDPRIRIASAG
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCEEEEECC
GVSLTKLKFVYLRQALRKRRINHTNSHNVLFNSPQHRQLLELKAIDYKHNTISLTEQQKT
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCCEEEEECCCCC
TLKIEPTANFVLLGTKCLKIITIHG
EEEEECCCCEEEEECEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]