| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488369
Identifier: 13488369
GI number: 13488369
Start: 180877
End: 181308
Strand: Direct
Name: 13488369
Synonym: msr9402
Alternate gene names: NA
Gene position: 180877-181308 (Clockwise)
Preceding gene: 13488236
Following gene: 13488237
Centisome position: 51.4
GC content: 57.41
Gene sequence:
>432_bases ATGACCAAACTGACATTGGAAGTCGCCAATTCCATCATTAATCGGGCGTGCTCTACAGCAAGCGGAAAAGGTCTCAAGCC CTTGAGCGTCGCGGTGTTGGATGCTGGTGGCCACTTGGTCGCGTTCCAGAAGCAGGACGGGGCTTCGATGCTCCGCTTTG AAATTGCATTCGGCAAGGCATACGGAGCTTTGGCCGTCGGTTTCGGTTCACGCTGGCTCGACAAAGCATCAGCCGACCGC CCTCACTTTGTAGCCGGACTCACCTCTATATCAGGTGGCAAGATTGTGCCCGTCCCCGGGGGCGTCCTGGTGAGAGACCA GGCCGGTCGGTTGCTTGGTGCGGTAGGGATTACTGGAGATACATCCGACAACGATGAAGCAGTGGCCGTGGAGGCCATCG AGATTGGCGGTTTGAATGCTCAAGCGGCCTGA
Upstream 100 bases:
>100_bases CGGCCATGCTGGCCACGGTTGTGGCCACGGATCTTCCGATTGATGCTCGTTTGGCAGCATAGAAGAAGTCCCTGCTTGCA AGCTCAAAGGAGAATTGAAT
Downstream 100 bases:
>100_bases CTCAGGCAACTAGGCAAGGGTTTCGAGTTCGTCGGGCAAGAGACGCAGATCTGGCGGCCGATCAGGCACATTTGAAATAG CGTCTGCTCCGTCGGCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Glcg Protein; Conserved Domain Protein
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTKLTLEVANSIINRACSTASGKGLKPLSVAVLDAGGHLVAFQKQDGASMLRFEIAFGKAYGALAVGFGSRWLDKASADR PHFVAGLTSISGGKIVPVPGGVLVRDQAGRLLGAVGITGDTSDNDEAVAVEAIEIGGLNAQAA
Sequences:
>Translated_143_residues MTKLTLEVANSIINRACSTASGKGLKPLSVAVLDAGGHLVAFQKQDGASMLRFEIAFGKAYGALAVGFGSRWLDKASADR PHFVAGLTSISGGKIVPVPGGVLVRDQAGRLLGAVGITGDTSDNDEAVAVEAIEIGGLNAQAA >Mature_142_residues TKLTLEVANSIINRACSTASGKGLKPLSVAVLDAGGHLVAFQKQDGASMLRFEIAFGKAYGALAVGFGSRWLDKASADRP HFVAGLTSISGGKIVPVPGGVLVRDQAGRLLGAVGITGDTSDNDEAVAVEAIEIGGLNAQAA
Specific function: Unknown
COG id: COG3193
COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14462; Mature: 14330
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLTLEVANSIINRACSTASGKGLKPLSVAVLDAGGHLVAFQKQDGASMLRFEIAFGKA CCEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEEECCC YGALAVGFGSRWLDKASADRPHFVAGLTSISGGKIVPVPGGVLVRDQAGRLLGAVGITGD CCEEEECCCCHHHHCCCCCCCEEEEEEEECCCCEEEECCCCEEEECCCCCEEEEEECCCC TSDNDEAVAVEAIEIGGLNAQAA CCCCCCEEEEEEEEECCCCCCCC >Mature Secondary Structure TKLTLEVANSIINRACSTASGKGLKPLSVAVLDAGGHLVAFQKQDGASMLRFEIAFGKA CEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEEECCC YGALAVGFGSRWLDKASADRPHFVAGLTSISGGKIVPVPGGVLVRDQAGRLLGAVGITGD CCEEEECCCCHHHHCCCCCCCEEEEEEEECCCCEEEECCCCEEEECCCCCEEEEEECCCC TSDNDEAVAVEAIEIGGLNAQAA CCCCCCEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA