| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is yqhT [H]
Identifier: 13488237
GI number: 13488237
Start: 181498
End: 182667
Strand: Direct
Name: yqhT [H]
Synonym: mlr9203
Alternate gene names: 13488237
Gene position: 181498-182667 (Clockwise)
Preceding gene: 13488369
Following gene: 13488356
Centisome position: 51.57
GC content: 58.03
Gene sequence:
>1170_bases ATGGATCAGCAAGCTTCCTACGGCTTTGCGCCGTCTGAGTTCGAGGAGCGTGTCGCCAGGGCTCAGCGGTTGATGGGCCA ACATCGCCTGGACGGCCTGTTGCTCACTTCGATGGACAATATCCGGTACTTCATCGGTGTCGATTCCACATTCTGGGAGA GTTACACCCGACCTTGGTTCGTATTGGTGCCTGCTACCGGGGTTCCCCTTGCGATCATTCCGGAGATCGGAAGGGCTATC ATCGAGAAGACGTGGATCAAGGAAATCAGATCCTGGCCTTCGCCTCGGCCCGAGGACGAAGGCACATCTCTCGTTGTCGC TGCGATATCCGACCTGCCCCGTCGACACGGGCGAGTCGGAGCTGAGCTTGGTTTCGAACTGCGACTGGGGATGCCGGTAA CGCAATTGAATGCGATCATCGGTGATCTGAAAAGCGTTGAGATTGTGGATGGCGCGAGCCTCATTTGGCAGCTCCGCATG ATCAAGAGCGCGGCCGAGATCTGTAAAATCAAGAAAGCTATCGACATCGCGGGCGCCGTATACGCTCAGGTGCCCGATTT CGTTAACATCGGCGATACTGAACGTACGATCCTTCGGGAGTTCCGTGGTCGCTTGAATATGGGCGGCGCCGGCGCTATCC CGACCCTCATTTGCAGATCCGACGTCGGCGGGCCTTTCGAGATTACGGGCGGGCCAAGGGACCGGCCAATCGCTGATGGC GATCTGCTCTTCATCGACACGGGCACGACCTTCGACGGGTATTTCTGCGATTACGATCGCAACTACCAGGTGGGCAGGGC GACAGATGCCCTACGGTTTGCCCACGAGAAGGTGTGGGAAGCGCACGAGATTGGGCTTCAAGCAGTAACAGCAGGGGTTA CGGCCGGATATGTGTTTGAACAGATGGCCAAGGCGCTTTCGTCCGGTGGGACGGACCTCAACAGCAACGGGCGCATGGGG CATGGACTTGGTTTGCGGCTGACCGAACCGCCGTCAATTCGACTGGAGGACAATACGGTGTTGCAGCCAGGCATGGTGCT CTGCATTGAGCCTGCCTTGGAGTACGAGCCCGGTAAAATCGTCCTGCATGAGGAAACAGTCGTGGTCACTGAAGGAAAGG CCCAACTGCTCACCCTTCGGGCGCCGAAGCAGCTAGCCCAGATACGCTGA
Upstream 100 bases:
>100_bases CGTCGGCGAGAATTTGGCATCTTTCGTGCACTGAGCGCCTTTAGATTGGTGGGCAGATGCAGCCGCCAGTGTCGAGAACG TTTGGATAGAGGGTTACAGA
Downstream 100 bases:
>100_bases TGGGGTTCCTTTCTTTCACCGAAGCTCTGTTTGGCGACGAGGTAGCTAGCGACCGCCGGTCATATGATCGAAAGCTCCCT TGCAACCTCCGCAAACGCCT
Product: peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MDQQASYGFAPSEFEERVARAQRLMGQHRLDGLLLTSMDNIRYFIGVDSTFWESYTRPWFVLVPATGVPLAIIPEIGRAI IEKTWIKEIRSWPSPRPEDEGTSLVVAAISDLPRRHGRVGAELGFELRLGMPVTQLNAIIGDLKSVEIVDGASLIWQLRM IKSAAEICKIKKAIDIAGAVYAQVPDFVNIGDTERTILREFRGRLNMGGAGAIPTLICRSDVGGPFEITGGPRDRPIADG DLLFIDTGTTFDGYFCDYDRNYQVGRATDALRFAHEKVWEAHEIGLQAVTAGVTAGYVFEQMAKALSSGGTDLNSNGRMG HGLGLRLTEPPSIRLEDNTVLQPGMVLCIEPALEYEPGKIVLHEETVVVTEGKAQLLTLRAPKQLAQIR
Sequences:
>Translated_389_residues MDQQASYGFAPSEFEERVARAQRLMGQHRLDGLLLTSMDNIRYFIGVDSTFWESYTRPWFVLVPATGVPLAIIPEIGRAI IEKTWIKEIRSWPSPRPEDEGTSLVVAAISDLPRRHGRVGAELGFELRLGMPVTQLNAIIGDLKSVEIVDGASLIWQLRM IKSAAEICKIKKAIDIAGAVYAQVPDFVNIGDTERTILREFRGRLNMGGAGAIPTLICRSDVGGPFEITGGPRDRPIADG DLLFIDTGTTFDGYFCDYDRNYQVGRATDALRFAHEKVWEAHEIGLQAVTAGVTAGYVFEQMAKALSSGGTDLNSNGRMG HGLGLRLTEPPSIRLEDNTVLQPGMVLCIEPALEYEPGKIVLHEETVVVTEGKAQLLTLRAPKQLAQIR >Mature_389_residues MDQQASYGFAPSEFEERVARAQRLMGQHRLDGLLLTSMDNIRYFIGVDSTFWESYTRPWFVLVPATGVPLAIIPEIGRAI IEKTWIKEIRSWPSPRPEDEGTSLVVAAISDLPRRHGRVGAELGFELRLGMPVTQLNAIIGDLKSVEIVDGASLIWQLRM IKSAAEICKIKKAIDIAGAVYAQVPDFVNIGDTERTILREFRGRLNMGGAGAIPTLICRSDVGGPFEITGGPRDRPIADG DLLFIDTGTTFDGYFCDYDRNYQVGRATDALRFAHEKVWEAHEIGLQAVTAGVTAGYVFEQMAKALSSGGTDLNSNGRMG HGLGLRLTEPPSIRLEDNTVLQPGMVLCIEPALEYEPGKIVLHEETVVVTEGKAQLLTLRAPKQLAQIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Escherichia coli, GI1788728, Length=229, Percent_Identity=29.2576419213974, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789275, Length=271, Percent_Identity=24.3542435424354, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 42762; Mature: 42762
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQQASYGFAPSEFEERVARAQRLMGQHRLDGLLLTSMDNIRYFIGVDSTFWESYTRPWF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCHHHHHHCCCCEE VLVPATGVPLAIIPEIGRAIIEKTWIKEIRSWPSPRPEDEGTSLVVAAISDLPRRHGRVG EEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHCCCC AELGFELRLGMPVTQLNAIIGDLKSVEIVDGASLIWQLRMIKSAAEICKIKKAIDIAGAV CCCCEEEEECCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAQVPDFVNIGDTERTILREFRGRLNMGGAGAIPTLICRSDVGGPFEITGGPRDRPIADG HHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHEECCCCCCCEEECCCCCCCCCCCC DLLFIDTGTTFDGYFCDYDRNYQVGRATDALRFAHEKVWEAHEIGLQAVTAGVTAGYVFE CEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMAKALSSGGTDLNSNGRMGHGLGLRLTEPPSIRLEDNTVLQPGMVLCIEPALEYEPGKI HHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCEECCCEEEEEECCCCCCCCEE VLHEETVVVTEGKAQLLTLRAPKQLAQIR EEEECEEEEECCCEEEEEEECCHHHHCCC >Mature Secondary Structure MDQQASYGFAPSEFEERVARAQRLMGQHRLDGLLLTSMDNIRYFIGVDSTFWESYTRPWF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCHHHHHHCCCCEE VLVPATGVPLAIIPEIGRAIIEKTWIKEIRSWPSPRPEDEGTSLVVAAISDLPRRHGRVG EEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHCCCC AELGFELRLGMPVTQLNAIIGDLKSVEIVDGASLIWQLRMIKSAAEICKIKKAIDIAGAV CCCCEEEEECCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAQVPDFVNIGDTERTILREFRGRLNMGGAGAIPTLICRSDVGGPFEITGGPRDRPIADG HHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHEECCCCCCCEEECCCCCCCCCCCC DLLFIDTGTTFDGYFCDYDRNYQVGRATDALRFAHEKVWEAHEIGLQAVTAGVTAGYVFE CEEEEECCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMAKALSSGGTDLNSNGRMGHGLGLRLTEPPSIRLEDNTVLQPGMVLCIEPALEYEPGKI HHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCEECCCEEEEEECCCCCCCCEE VLHEETVVVTEGKAQLLTLRAPKQLAQIR EEEECEEEEECCCEEEEEEECCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]