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The map label for this gene is dadA3

Identifier: 13488236

GI number: 13488236

Start: 179600

End: 180838

Strand: Direct

Name: dadA3

Synonym: mlr9201

Alternate gene names: 13488236

Gene position: 179600-180838 (Clockwise)

Preceding gene: 13488235

Following gene: 13488369

Centisome position: 51.04

GC content: 57.63

Gene sequence:

>1239_bases
ATGCCCAAAATTGTTGTGATTGGCGCCGGAATTGCCGGTGTATCGACGGCTTATGCGTTGTTGGAGCAAGGCTACGACGT
CACTGTGGTCGAGCGGCGACGCTATGCCGCGATGGAAACGTCATTCGCCAACGGCGGCCAGCTGTCGGCAAGCAATGCCG
AAGTCTGGAATCACTGGTCAACCGTCCTCAAGGGCATCAAGTGGATGCTTCGGCGGGATGCGCCGCTCCTCATGAACCCT
ACCCCGTCGTGGCACAAGTACAGCTGGCTGCTTGAATTCGTATCCAATATTTCGCGATATCGTGAAAACACGATTGAAAC
GACCCGCCTGGCTATCGCTGCCCGAAAGCACCTCTTCGAGATCGCTGACCGTGAAGGCATCGACTTTGATCACGTCCGTC
GCGGGATCCTGCATGTTTACTGGGACAAAGACGGCTTCGACCATGCGTTGAAGGTGAATGAGATGCTGAACGAGGGCGGC
CTCGACCGGCGATCGGTGACGCCCAGCGAATTTGCCGGGATTGAACCTGCCTTGCATGGCAAGTTTTATGGAGGGTTTTA
CACCCCGTCGGATTCGACCGGCGACATCCACAAATATTGCGCGGGCTTGGAGAAGGCCTGCACAAAGCGTGGCGCCCAAT
TCATCTATGACGCCGCAGTGACCCGCATTGAACGCCGGGATCGCTTTAACATCGTTTGCGCAACGGATGGCGCCGATCAG
ACGCTGGTAGCCGACGGGATTGTAGTGTGTGCGGGAACAAATAGCCGCGATATCGCTGCGATGTTCGGGGATCGCATCAA
TATTTATCCGGTGAAAGGGTATTCCATTACGGTGGAGTTGGACGGGGCTGCGGCAGATTCCTCCGCGCCTTGGGTAAGCA
TTCTGGACGACCGCGCAAAAATCGTGACCAGCCGGCTCGGCGCAGCTCGGCTGCGGGTGGCAGGGACCGCAGAGTTCAAT
GGCGTCAATTTCGACATCCGCGAAGATCGCATCAGACCCTTGGTCGACTGGACGCGGATGATGTTCCCGAAAGTGGCGAC
TGAACACGTTGTGCCGTGGGCAGGGCTTCGACCGATGATGCCGAACATGATGCCGCGGGTCGGCAAAAGCCGGGTTCCGG
GTGTCTTCTATAATACGGGTCACGGGCATCTAGGGTGGACGCTTTCTGCCGCAACATCGGCCATGCTGGCCACGGTTGTG
GCCACGGATCTTCCGATTGATGCTCGTTTGGCAGCATAG

Upstream 100 bases:

>100_bases
GAAAGCCGGCAGGCCCGGTTAAGCTCTCAGGTAGCCGAGACAGATTTGGGGATTTCGCTGCGGGCCAACCTCGCACCCAT
TGCACTGCTCGGAGTTCAGA

Downstream 100 bases:

>100_bases
AAGAAGTCCCTGCTTGCAAGCTCAAAGGAGAATTGAATATGACCAAACTGACATTGGAAGTCGCCAATTCCATCATTAAT
CGGGCGTGCTCTACAGCAAG

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MPKIVVIGAGIAGVSTAYALLEQGYDVTVVERRRYAAMETSFANGGQLSASNAEVWNHWSTVLKGIKWMLRRDAPLLMNP
TPSWHKYSWLLEFVSNISRYRENTIETTRLAIAARKHLFEIADREGIDFDHVRRGILHVYWDKDGFDHALKVNEMLNEGG
LDRRSVTPSEFAGIEPALHGKFYGGFYTPSDSTGDIHKYCAGLEKACTKRGAQFIYDAAVTRIERRDRFNIVCATDGADQ
TLVADGIVVCAGTNSRDIAAMFGDRINIYPVKGYSITVELDGAAADSSAPWVSILDDRAKIVTSRLGAARLRVAGTAEFN
GVNFDIREDRIRPLVDWTRMMFPKVATEHVVPWAGLRPMMPNMMPRVGKSRVPGVFYNTGHGHLGWTLSAATSAMLATVV
ATDLPIDARLAA

Sequences:

>Translated_412_residues
MPKIVVIGAGIAGVSTAYALLEQGYDVTVVERRRYAAMETSFANGGQLSASNAEVWNHWSTVLKGIKWMLRRDAPLLMNP
TPSWHKYSWLLEFVSNISRYRENTIETTRLAIAARKHLFEIADREGIDFDHVRRGILHVYWDKDGFDHALKVNEMLNEGG
LDRRSVTPSEFAGIEPALHGKFYGGFYTPSDSTGDIHKYCAGLEKACTKRGAQFIYDAAVTRIERRDRFNIVCATDGADQ
TLVADGIVVCAGTNSRDIAAMFGDRINIYPVKGYSITVELDGAAADSSAPWVSILDDRAKIVTSRLGAARLRVAGTAEFN
GVNFDIREDRIRPLVDWTRMMFPKVATEHVVPWAGLRPMMPNMMPRVGKSRVPGVFYNTGHGHLGWTLSAATSAMLATVV
ATDLPIDARLAA
>Mature_411_residues
PKIVVIGAGIAGVSTAYALLEQGYDVTVVERRRYAAMETSFANGGQLSASNAEVWNHWSTVLKGIKWMLRRDAPLLMNPT
PSWHKYSWLLEFVSNISRYRENTIETTRLAIAARKHLFEIADREGIDFDHVRRGILHVYWDKDGFDHALKVNEMLNEGGL
DRRSVTPSEFAGIEPALHGKFYGGFYTPSDSTGDIHKYCAGLEKACTKRGAQFIYDAAVTRIERRDRFNIVCATDGADQT
LVADGIVVCAGTNSRDIAAMFGDRINIYPVKGYSITVELDGAAADSSAPWVSILDDRAKIVTSRLGAARLRVAGTAEFNG
VNFDIREDRIRPLVDWTRMMFPKVATEHVVPWAGLRPMMPNMMPRVGKSRVPGVFYNTGHGHLGWTLSAATSAMLATVVA
TDLPIDARLAA

Specific function: Oxidative deamination of D-amino acids

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787438, Length=411, Percent_Identity=31.3868613138686, Blast_Score=211, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DADA3_RHILO (Q981X2)

Other databases:

- EMBL:   BA000013
- RefSeq:   NP_085746.1
- ProteinModelPortal:   Q981X2
- GeneID:   1231405
- GenomeReviews:   BA000013_GR
- KEGG:   mlo:mlr9201
- NMPDR:   fig|266835.1.peg.6900
- HOGENOM:   HBG729204
- OMA:   HRYAAME
- ProtClustDB:   PRK12409
- BRENDA:   1.4.99.1
- HAMAP:   MF_01202
- InterPro:   IPR023080
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: =1.4.99.1

Molecular weight: Translated: 45556; Mature: 45424

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIVVIGAGIAGVSTAYALLEQGYDVTVVERRRYAAMETSFANGGQLSASNAEVWNHWS
CCEEEEEECCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCEECCCCCHHHHHHH
TVLKGIKWMLRRDAPLLMNPTPSWHKYSWLLEFVSNISRYRENTIETTRLAIAARKHLFE
HHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IADREGIDFDHVRRGILHVYWDKDGFDHALKVNEMLNEGGLDRRSVTPSEFAGIEPALHG
HHCCCCCCHHHHHHCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHCC
KFYGGFYTPSDSTGDIHKYCAGLEKACTKRGAQFIYDAAVTRIERRDRFNIVCATDGADQ
EEECCEECCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEEECCCCCC
TLVADGIVVCAGTNSRDIAAMFGDRINIYPVKGYSITVELDGAAADSSAPWVSILDDRAK
EEEECCEEEEECCCCCCHHHHHCCCEEEEEECCEEEEEEECCCCCCCCCCEEEEHHHHHH
IVTSRLGAARLRVAGTAEFNGVNFDIREDRIRPLVDWTRMMFPKVATEHVVPWAGLRPMM
HHHHHCCCEEEEEEECCEECCCEEEECHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PNMMPRVGKSRVPGVFYNTGHGHLGWTLSAATSAMLATVVATDLPIDARLAA
HHHHHHCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure 
PKIVVIGAGIAGVSTAYALLEQGYDVTVVERRRYAAMETSFANGGQLSASNAEVWNHWS
CEEEEEECCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCEECCCCCHHHHHHH
TVLKGIKWMLRRDAPLLMNPTPSWHKYSWLLEFVSNISRYRENTIETTRLAIAARKHLFE
HHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IADREGIDFDHVRRGILHVYWDKDGFDHALKVNEMLNEGGLDRRSVTPSEFAGIEPALHG
HHCCCCCCHHHHHHCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHCC
KFYGGFYTPSDSTGDIHKYCAGLEKACTKRGAQFIYDAAVTRIERRDRFNIVCATDGADQ
EEECCEECCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEEECCCCCC
TLVADGIVVCAGTNSRDIAAMFGDRINIYPVKGYSITVELDGAAADSSAPWVSILDDRAK
EEEECCEEEEECCCCCCHHHHHCCCEEEEEECCEEEEEEECCCCCCCCCCEEEEHHHHHH
IVTSRLGAARLRVAGTAEFNGVNFDIREDRIRPLVDWTRMMFPKVATEHVVPWAGLRPMM
HHHHHCCCEEEEEEECCEECCCEEEECHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PNMMPRVGKSRVPGVFYNTGHGHLGWTLSAATSAMLATVVATDLPIDARLAA
HHHHHHCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11214968