| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
Click here to switch to the map view.
The map label for this gene is 13488350
Identifier: 13488350
GI number: 13488350
Start: 87857
End: 88045
Strand: Direct
Name: 13488350
Synonym: msr9110
Alternate gene names: NA
Gene position: 87857-88045 (Clockwise)
Preceding gene: 13488214
Following gene: 13488215
Centisome position: 24.97
GC content: 53.44
Gene sequence:
>189_bases ATGTCGACGGATCCTACATTGATCAACCAGCTCGTCGTCACCGCCACCGACTACGCCTTCAGGCAGAAGGTCAGCACGCC ATTGATATGGCTCTCGCATTCGCCTGCTCACCCGCAGGCTCGCAAGAGCTTGATTGTTCCAACCTTCGTCTTCTTGCAGG CAAACCTTCCAATTCTGACAATCACATGA
Upstream 100 bases:
>100_bases TTGACGCCGAGGCCGAGGCCGACGAGCGATCATCATTTCGCGAATCTATAGGGCGCGCGCCAATGCTTGTGTTGGTTGCT GACAAGTGGTCAATCTATGA
Downstream 100 bases:
>100_bases ACTGAGTTATGATCTGATTATGATAGCCATGGCTCGCATGGTTCGAGAGGCTTGTCGGCATGTCGCAAATTTATGTTCCC AGCTCAGGGCCGGATAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MSTDPTLINQLVVTATDYAFRQKVSTPLIWLSHSPAHPQARKSLIVPTFVFLQANLPILTIT
Sequences:
>Translated_62_residues MSTDPTLINQLVVTATDYAFRQKVSTPLIWLSHSPAHPQARKSLIVPTFVFLQANLPILTIT >Mature_61_residues STDPTLINQLVVTATDYAFRQKVSTPLIWLSHSPAHPQARKSLIVPTFVFLQANLPILTIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6903; Mature: 6772
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDPTLINQLVVTATDYAFRQKVSTPLIWLSHSPAHPQARKSLIVPTFVFLQANLPILT CCCCHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCCCCEEECCEEEEEECCCCEEE IT EC >Mature Secondary Structure STDPTLINQLVVTATDYAFRQKVSTPLIWLSHSPAHPQARKSLIVPTFVFLQANLPILT CCCHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCCCCEEECCEEEEEECCCCEEE IT EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA