| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488215
Identifier: 13488215
GI number: 13488215
Start: 88709
End: 89233
Strand: Direct
Name: 13488215
Synonym: mlr9111
Alternate gene names: NA
Gene position: 88709-89233 (Clockwise)
Preceding gene: 13488350
Following gene: 13488351
Centisome position: 25.21
GC content: 55.24
Gene sequence:
>525_bases GTGGCCGACGCCTTCGGTTGGGTTGGGCGACCGGAAATCCGGAACATCTCTCAGATTGAAGGCCCCATCATCTTGCAAAC GAGACTGTACACGTCAAAGCAGATGGGTGACGCTTGCGAGATGGTGGTCGCCGCTGAACTGACCCTTGCCGGAGTGCCGG CTCTCAAAGTTCCTGACAACTGGCCTGGCTACGATGTCATCGCTCAGCCAGTCGGGCATTCCCCGCAAAGGGTGTCTGTA AAATCTCGAACGTTCAAACAAGGGCCATCCTACGTCACCTACGACGACTTCGATCAGTTCGATTGGCTTGCAATCGTTAT CCTGCTGCCGGACGTAACAAATGGCAGGGCAATTTACCTGATCCCGAGAGACGTTTCCGACGCCCTCGCGCGTAGGGATA AACCAACCAGCAAGACGGCTGCCGAGCGCTATTTCCGGGTCGATCAAGTTGAGAGTTTGTTTGCAAAATATCGCAACAAC TTCATTCTCGACCCTGTCGGGCGAGACGTTGTGGCGGTGCCGTAA
Upstream 100 bases:
>100_bases TTCTCCGTCTCCCGGATGTGGTTCACTGACTTCGAGCGGTTTGCCAGCCTTTTCGGCATGTCGGCTCGACCAGACCAACC AATCATCATCGTTTTGAAAA
Downstream 100 bases:
>100_bases GATGAGATATTTTCGACTAAGCCGCTCCGCGATTGCGGAGCCGGCGTGGGGGTAGCAGCAAGGTGCGATGAGGCTAACCA TTTCTTTACTACCAGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MADAFGWVGRPEIRNISQIEGPIILQTRLYTSKQMGDACEMVVAAELTLAGVPALKVPDNWPGYDVIAQPVGHSPQRVSV KSRTFKQGPSYVTYDDFDQFDWLAIVILLPDVTNGRAIYLIPRDVSDALARRDKPTSKTAAERYFRVDQVESLFAKYRNN FILDPVGRDVVAVP
Sequences:
>Translated_174_residues MADAFGWVGRPEIRNISQIEGPIILQTRLYTSKQMGDACEMVVAAELTLAGVPALKVPDNWPGYDVIAQPVGHSPQRVSV KSRTFKQGPSYVTYDDFDQFDWLAIVILLPDVTNGRAIYLIPRDVSDALARRDKPTSKTAAERYFRVDQVESLFAKYRNN FILDPVGRDVVAVP >Mature_173_residues ADAFGWVGRPEIRNISQIEGPIILQTRLYTSKQMGDACEMVVAAELTLAGVPALKVPDNWPGYDVIAQPVGHSPQRVSVK SRTFKQGPSYVTYDDFDQFDWLAIVILLPDVTNGRAIYLIPRDVSDALARRDKPTSKTAAERYFRVDQVESLFAKYRNNF ILDPVGRDVVAVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19456; Mature: 19325
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAFGWVGRPEIRNISQIEGPIILQTRLYTSKQMGDACEMVVAAELTLAGVPALKVPDN CCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHCCCCEEECCCC WPGYDVIAQPVGHSPQRVSVKSRTFKQGPSYVTYDDFDQFDWLAIVILLPDVTNGRAIYL CCCHHHEECCCCCCCCEEEHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCEEEE IPRDVSDALARRDKPTSKTAAERYFRVDQVESLFAKYRNNFILDPVGRDVVAVP EECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEECC >Mature Secondary Structure ADAFGWVGRPEIRNISQIEGPIILQTRLYTSKQMGDACEMVVAAELTLAGVPALKVPDN CCCCCCCCCCCCCCHHHCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHCCCCEEECCCC WPGYDVIAQPVGHSPQRVSVKSRTFKQGPSYVTYDDFDQFDWLAIVILLPDVTNGRAIYL CCCHHHEECCCCCCCCEEEHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCEEEE IPRDVSDALARRDKPTSKTAAERYFRVDQVESLFAKYRNNFILDPVGRDVVAVP EECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA