| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is yxeQ [H]
Identifier: 13488316
GI number: 13488316
Start: 338879
End: 340219
Strand: Direct
Name: yxeQ [H]
Synonym: mlr9381
Alternate gene names: 13488316
Gene position: 338879-340219 (Clockwise)
Preceding gene: 13488315
Following gene: 13488317
Centisome position: 96.3
GC content: 59.66
Gene sequence:
>1341_bases ATGTGGTCGGCGGAAAAATTGGCGGGCCTCATCACCGAATTTGATCCTTCGGTCATTTCGCAGGCCACGCGTGGAAAGGT ATCCGATCTGGTCATTGACGTCGTTGGCGCCGCCGCGGCCGGGGCTCGCACCGAGGCCGCCGCTGCAACCCGCGCCGTGT GCCAAGGCCTCTTCTTTCCCGGCTTGGCACTGTGCTGGTTCACTGACAAAAGGCTCTCACCTGCCGCCGCTGCGTTTGCA AATAGCGCGGCTGCAGTTGCCCTCGACATTGATGATGGACACCGGCGAGCGATCGGGCATCCGGGTGCGGCAATCATTCC GGCCATGATCGCTGAAGCGGAAGCACGCGGCGCGAGTTCCGAGGAGCTGCTCGCCGCGATCGTTGTCGGATATGAGGCTG GCATCCGTGTCGCCTCAGCCCAGTCCAACAGACAGGATAGCCGCCTCTATGCGACGGGGCGGTGGGCACCTGTCGCAGTT GCTGCGGGGCTTGGCTTTCTCCGCCGCCTCGACAGGGCGAGCGTTGCGCAGGCCTTGGCGATAGCCGCGACCCATCGCCC AGCGCAACTGCCAAGTGGGACCAGCAAACAGCTAGGACACGCTAAGGAGGGCATAGCTTGGGCTTCCTTCACCGGCTTCG TGGCGGTCGACCTTGCACAGAATGGATTCACTGCATCGCTCGACATCTTCGATATACCAGAGCTTTTCGATGGGAGCGCA TTGGATCGCGACTGGGGAGAGGTGATCGAGATCGATCGCACCTACACCAAGCCCTATTCGTGTTGCAGATGGATTCACGC AGCCATTGATGCTCTGCGCATTATCATGGATCGCGAGGCGGTGCTGGCACGTGATATCTCCCGCGTGGGGGTCCATACGA TCGGACCCGCGGTCCGATTGAACAACAAACCGGATCCATCGGCACATTTCGAGGCCCAGTTCAGTGTTCCATTCTGCCTT GCGGTGGCAGCGATTGAAGGAAGCAATGCCCTGGTCCTGCCCGATCCTGCCGTCCTTCACCGATCGGATCTCATCAGCTT CGCGCGGAAGGTCGACCTAAGGATCGATCCCGAACTCGACGCCCTTTTTCCGGCTCGGACTAGCGCCCGGTTGGTCGTGG AGACGCGATCAGGCGTCTATGAACACCAAGTCGACTTCCCAAAGGGAGAGCCAGACAACGCAATGACCCGCTCCGAACTC TTGGAGAAATTTGAGCGGCTCTGCACTTTTGGTCACGGTCCTTCCAAAGCAGCCCGGCTTGCTACTGCCTTCGCTATCCT AGACGATAGGACACTTGACAATGTCACTCAGCACATCTCCGAAATTATCCTACCAACATGA
Upstream 100 bases:
>100_bases TTAAAGCCATCGGCATTTCGCTCGCGGAACGGAGGTGGGTGAGCCTTGACGAAACCTCGGCGAGGTCGCGGGCCGATGAA CGCAAATCGGGGATCCTCTG
Downstream 100 bases:
>100_bases ATCGGCCGACGGTTCGGAAGCTCTGCCAAACGCACGGAGAAAACCAATGAGACGGTCGTTCGATGCAGAGGGATGGCGCG AGCGATTCCTGATCCTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MWSAEKLAGLITEFDPSVISQATRGKVSDLVIDVVGAAAAGARTEAAAATRAVCQGLFFPGLALCWFTDKRLSPAAAAFA NSAAAVALDIDDGHRRAIGHPGAAIIPAMIAEAEARGASSEELLAAIVVGYEAGIRVASAQSNRQDSRLYATGRWAPVAV AAGLGFLRRLDRASVAQALAIAATHRPAQLPSGTSKQLGHAKEGIAWASFTGFVAVDLAQNGFTASLDIFDIPELFDGSA LDRDWGEVIEIDRTYTKPYSCCRWIHAAIDALRIIMDREAVLARDISRVGVHTIGPAVRLNNKPDPSAHFEAQFSVPFCL AVAAIEGSNALVLPDPAVLHRSDLISFARKVDLRIDPELDALFPARTSARLVVETRSGVYEHQVDFPKGEPDNAMTRSEL LEKFERLCTFGHGPSKAARLATAFAILDDRTLDNVTQHISEIILPT
Sequences:
>Translated_446_residues MWSAEKLAGLITEFDPSVISQATRGKVSDLVIDVVGAAAAGARTEAAAATRAVCQGLFFPGLALCWFTDKRLSPAAAAFA NSAAAVALDIDDGHRRAIGHPGAAIIPAMIAEAEARGASSEELLAAIVVGYEAGIRVASAQSNRQDSRLYATGRWAPVAV AAGLGFLRRLDRASVAQALAIAATHRPAQLPSGTSKQLGHAKEGIAWASFTGFVAVDLAQNGFTASLDIFDIPELFDGSA LDRDWGEVIEIDRTYTKPYSCCRWIHAAIDALRIIMDREAVLARDISRVGVHTIGPAVRLNNKPDPSAHFEAQFSVPFCL AVAAIEGSNALVLPDPAVLHRSDLISFARKVDLRIDPELDALFPARTSARLVVETRSGVYEHQVDFPKGEPDNAMTRSEL LEKFERLCTFGHGPSKAARLATAFAILDDRTLDNVTQHISEIILPT >Mature_446_residues MWSAEKLAGLITEFDPSVISQATRGKVSDLVIDVVGAAAAGARTEAAAATRAVCQGLFFPGLALCWFTDKRLSPAAAAFA NSAAAVALDIDDGHRRAIGHPGAAIIPAMIAEAEARGASSEELLAAIVVGYEAGIRVASAQSNRQDSRLYATGRWAPVAV AAGLGFLRRLDRASVAQALAIAATHRPAQLPSGTSKQLGHAKEGIAWASFTGFVAVDLAQNGFTASLDIFDIPELFDGSA LDRDWGEVIEIDRTYTKPYSCCRWIHAAIDALRIIMDREAVLARDISRVGVHTIGPAVRLNNKPDPSAHFEAQFSVPFCL AVAAIEGSNALVLPDPAVLHRSDLISFARKVDLRIDPELDALFPARTSARLVVETRSGVYEHQVDFPKGEPDNAMTRSEL LEKFERLCTFGHGPSKAARLATAFAILDDRTLDNVTQHISEIILPT
Specific function: Unknown
COG id: COG2079
COG function: function code R; Uncharacterized protein involved in propionate catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prpD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005656 [H]
Pfam domain/function: PF03972 MmgE_PrpD [H]
EC number: NA
Molecular weight: Translated: 47622; Mature: 47622
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSAEKLAGLITEFDPSVISQATRGKVSDLVIDVVGAAAAGARTEAAAATRAVCQGLFFP CCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH GLALCWFTDKRLSPAAAAFANSAAAVALDIDDGHRRAIGHPGAAIIPAMIAEAEARGASS HHEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCH EELLAAIVVGYEAGIRVASAQSNRQDSRLYATGRWAPVAVAAGLGFLRRLDRASVAQALA HHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH IAATHRPAQLPSGTSKQLGHAKEGIAWASFTGFVAVDLAQNGFTASLDIFDIPELFDGSA HHHCCCCCCCCCCCHHHHCCHHCCCEEEEECCEEEEEECCCCCEEEEECCCCHHHHCCCC LDRDWGEVIEIDRTYTKPYSCCRWIHAAIDALRIIMDREAVLARDISRVGVHTIGPAVRL CCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEE NNKPDPSAHFEAQFSVPFCLAVAAIEGSNALVLPDPAVLHRSDLISFARKVDLRIDPELD CCCCCCCCCEEEECCCCEEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHCCCEECCCCC ALFPARTSARLVVETRSGVYEHQVDFPKGEPDNAMTRSELLEKFERLCTFGHGPSKAARL CCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH ATAFAILDDRTLDNVTQHISEIILPT HHHHHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MWSAEKLAGLITEFDPSVISQATRGKVSDLVIDVVGAAAAGARTEAAAATRAVCQGLFFP CCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH GLALCWFTDKRLSPAAAAFANSAAAVALDIDDGHRRAIGHPGAAIIPAMIAEAEARGASS HHEEEEECCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCH EELLAAIVVGYEAGIRVASAQSNRQDSRLYATGRWAPVAVAAGLGFLRRLDRASVAQALA HHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH IAATHRPAQLPSGTSKQLGHAKEGIAWASFTGFVAVDLAQNGFTASLDIFDIPELFDGSA HHHCCCCCCCCCCCHHHHCCHHCCCEEEEECCEEEEEECCCCCEEEEECCCCHHHHCCCC LDRDWGEVIEIDRTYTKPYSCCRWIHAAIDALRIIMDREAVLARDISRVGVHTIGPAVRL CCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEE NNKPDPSAHFEAQFSVPFCLAVAAIEGSNALVLPDPAVLHRSDLISFARKVDLRIDPELD CCCCCCCCCEEEECCCCEEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHCCCEECCCCC ALFPARTSARLVVETRSGVYEHQVDFPKGEPDNAMTRSELLEKFERLCTFGHGPSKAARL CCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH ATAFAILDDRTLDNVTQHISEIILPT HHHHHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]