| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476631
Identifier: 13476631
GI number: 13476631
Start: 6599388
End: 6599780
Strand: Direct
Name: 13476631
Synonym: mlr8012
Alternate gene names: NA
Gene position: 6599388-6599780 (Clockwise)
Preceding gene: 13476630
Following gene: 13476632
Centisome position: 93.79
GC content: 62.6
Gene sequence:
>393_bases ATGGCCTGCCGGCCATTATGGTGGTGTGACGTGGGTTTTTACGACGAGATGGCCGGTGTCGCCACCGACCTGCTGACCGA GTTCAACCAGGGCGTCGTCAAGTTGAAGCGCGAGACGCCTGGCGTGGTCGATCCCGAACAGCCGTGGATGCCAGTCGAGC CGACTGTGCAGATTTGGCCGCTCAATGCCGTCGTGAAGCGCATACACCAGCGCTATGAGGACGGCATCCTGATCGTCGAG ACCGGCGACATGGTGACGTTCGCCGTGCCGGCCGTCGTTCCGCAGCTGAGCGATTTCCTTGCCATCGACGGCACCGACCG CGCCATCACAAACCTGACGTCTATTCCGCCGGCAGGTGTCGTCGTGGCCTACAAGGCATGGTGCGCCGCCTAA
Upstream 100 bases:
>100_bases GAATTTTTCGAGCCCGGGGACAATGGCAACATTTTCGCGCCGAATGCTCCTGTCTCGACCATTATCGAAGGCTTACTCGC CCCGTTGATCGGGCCTGTCT
Downstream 100 bases:
>100_bases TTCACCTACTTCACCTGCGCGGGTACGATGACTTTGTAAATGTTGCCGCAGCCAGGCGGTGTCGGCACCTTCACGCAGCG TTCGATAAGGGATCGATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MACRPLWWCDVGFYDEMAGVATDLLTEFNQGVVKLKRETPGVVDPEQPWMPVEPTVQIWPLNAVVKRIHQRYEDGILIVE TGDMVTFAVPAVVPQLSDFLAIDGTDRAITNLTSIPPAGVVVAYKAWCAA
Sequences:
>Translated_130_residues MACRPLWWCDVGFYDEMAGVATDLLTEFNQGVVKLKRETPGVVDPEQPWMPVEPTVQIWPLNAVVKRIHQRYEDGILIVE TGDMVTFAVPAVVPQLSDFLAIDGTDRAITNLTSIPPAGVVVAYKAWCAA >Mature_129_residues ACRPLWWCDVGFYDEMAGVATDLLTEFNQGVVKLKRETPGVVDPEQPWMPVEPTVQIWPLNAVVKRIHQRYEDGILIVET GDMVTFAVPAVVPQLSDFLAIDGTDRAITNLTSIPPAGVVVAYKAWCAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14343; Mature: 14212
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACRPLWWCDVGFYDEMAGVATDLLTEFNQGVVKLKRETPGVVDPEQPWMPVEPTVQIWP CCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEE LNAVVKRIHQRYEDGILIVETGDMVTFAVPAVVPQLSDFLAIDGTDRAITNLTSIPPAGV HHHHHHHHHHHHHCCEEEEECCCEEEEHHHHHHHHHHHHEEECCCCHHHHHHCCCCCCCE VVAYKAWCAA EEEHHHHHCC >Mature Secondary Structure ACRPLWWCDVGFYDEMAGVATDLLTEFNQGVVKLKRETPGVVDPEQPWMPVEPTVQIWP CCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEE LNAVVKRIHQRYEDGILIVETGDMVTFAVPAVVPQLSDFLAIDGTDRAITNLTSIPPAGV HHHHHHHHHHHHHCCEEEEECCCEEEEHHHHHHHHHHHHEEECCCCHHHHHHCCCCCCCE VVAYKAWCAA EEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA