| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476630
Identifier: 13476630
GI number: 13476630
Start: 6598931
End: 6599416
Strand: Direct
Name: 13476630
Synonym: mlr8011
Alternate gene names: NA
Gene position: 6598931-6599416 (Clockwise)
Preceding gene: 13476629
Following gene: 13476631
Centisome position: 93.79
GC content: 61.32
Gene sequence:
>486_bases ATGGCCGGCTACGGATCGGATAACGCCCTCAAGGCGTATTGGGACGCGGCCGGGTATACCTATGCGGCGGATGCCCCGTT TGCAGCGCTCAGGCAGCGGGGCAGCGCCTATATCGACGGGACTTATGGGCTGCGGTTTACGGGCCAGCCGACCGGTGGAA TTGATCAAGAGCGAGCTTGGCCCAGGACAGGCGCAACCGCCTATGGTGCCGCGCTTGCATCTGACCTGATCCCCACGAGG GTTGAGCAGGCCAGCTACGAGGCCGCCTACGTCGAATTGAAAAAGCCGGGCTCGCTGTCGATCTCATTCGACCCGGCGCA ACGTGTGAAGCGCCAGAAGGTCGACGTCATCGAGCGCGAATTTTTCGAGCCCGGGGACAATGGCAACATTTTCGCGCCGA ATGCTCCTGTCTCGACCATTATCGAAGGCTTACTCGCCCCGTTGATCGGGCCTGTCTATGGCCTGCCGGCCATTATGGTG GTGTGA
Upstream 100 bases:
>100_bases AGTCGGCGGCTTCCAAGCTGCTCGGCGACAAGACACCTGAGAAGAAGGCCGAGATCGTCGCGGCTCTCGAAGATCTGGCA ACGAAGCCGGAGTAACGACC
Downstream 100 bases:
>100_bases CGTGGGTTTTTACGACGAGATGGCCGGTGTCGCCACCGACCTGCTGACCGAGTTCAACCAGGGCGTCGTCAAGTTGAAGC GCGAGACGCCTGGCGTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MAGYGSDNALKAYWDAAGYTYAADAPFAALRQRGSAYIDGTYGLRFTGQPTGGIDQERAWPRTGATAYGAALASDLIPTR VEQASYEAAYVELKKPGSLSISFDPAQRVKRQKVDVIEREFFEPGDNGNIFAPNAPVSTIIEGLLAPLIGPVYGLPAIMV V
Sequences:
>Translated_161_residues MAGYGSDNALKAYWDAAGYTYAADAPFAALRQRGSAYIDGTYGLRFTGQPTGGIDQERAWPRTGATAYGAALASDLIPTR VEQASYEAAYVELKKPGSLSISFDPAQRVKRQKVDVIEREFFEPGDNGNIFAPNAPVSTIIEGLLAPLIGPVYGLPAIMV V >Mature_160_residues AGYGSDNALKAYWDAAGYTYAADAPFAALRQRGSAYIDGTYGLRFTGQPTGGIDQERAWPRTGATAYGAALASDLIPTRV EQASYEAAYVELKKPGSLSISFDPAQRVKRQKVDVIEREFFEPGDNGNIFAPNAPVSTIIEGLLAPLIGPVYGLPAIMVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17194; Mature: 17063
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGYGSDNALKAYWDAAGYTYAADAPFAALRQRGSAYIDGTYGLRFTGQPTGGIDQERAW CCCCCCCCCEEEEECCCCCEEECCCCHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCC PRTGATAYGAALASDLIPTRVEQASYEAAYVELKKPGSLSISFDPAQRVKRQKVDVIERE CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHH FFEPGDNGNIFAPNAPVSTIIEGLLAPLIGPVYGLPAIMVV HCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEC >Mature Secondary Structure AGYGSDNALKAYWDAAGYTYAADAPFAALRQRGSAYIDGTYGLRFTGQPTGGIDQERAW CCCCCCCCEEEEECCCCCEEECCCCHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCC PRTGATAYGAALASDLIPTRVEQASYEAAYVELKKPGSLSISFDPAQRVKRQKVDVIERE CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHH FFEPGDNGNIFAPNAPVSTIIEGLLAPLIGPVYGLPAIMVV HCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA