| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13476632
Identifier: 13476632
GI number: 13476632
Start: 6600341
End: 6601381
Strand: Direct
Name: 13476632
Synonym: mlr8013
Alternate gene names: NA
Gene position: 6600341-6601381 (Clockwise)
Preceding gene: 13476631
Following gene: 13476633
Centisome position: 93.81
GC content: 61.38
Gene sequence:
>1041_bases ATGCTCGTCCGCCTCACGCCTCGTCAGCGCTTCGAGATTCTTGTCTCTCAGTTCGAACCAGCCGTTCGCGCCGGCTTCAT CGAGGCGATCGACGATATAACCTCGAACATAGTCCTGCGCCGAATTGTCGAGCGCCTGGAGCGCGGCGACATCAACGGCG CGGTCAATGCCATGAACCTCGACCCGGCAGCCTTCCGGCCACTGGATGAAGCGATCAGGGCGGCATTCAACGGCGGCGGC GTCGCCACTGTCGACGCCATGCCAACCCTGCGTGACCCATCCGGCCATCGCATCGTGGTTCGCTGGGATGCGCGCAATCT AGCAGCAGAGCAATGGATACAGACGCATTCTAGCCAGCTGATCACCGGCATCGTCCAGGACCAACAGACCGCGATCAGGG CTGCCTTGGAGACAGGGCTGGCACGCGGGGAGAATCCGACGAAGACCGCGACGGCTGTTATCGGCAAGGTCAGCGCCGTC ACTGGTAAGCGCGAAGGCGGGTTGATCGGGCTCACCACAGCGCAAAGCGAATACATTGCCCGAGCCCGCCAAGAGCTGCT TACTGGCGAGCCCGACCAGTTGAAGGCCTATCTGAACCGGCAGCGTCGCGACAAACGTTTCGATCGCACGATCACAGCGG CGATCCGAGATGGTAAACCAATCCCTACCGCATTGGTCGACAGGATCACCGGGCGGTATGCGGACAGCCTTTTGAAACTG AGGGTCGACACCATCGGTCTGCATGAGACCTTCGCCGCCTTGGGCGCCTCGAAAGACATCGCGTTCCGCCAGCAGATCGA GAAGGGCACCCTTCAGGCCCAGCACATCACCAAGGGCTGGAAGCATACGCCGCAGGAGCACGGCAGGATGCAGCATATCG CCATGCAGGGGCAGGTAGTGCCGTTCGATCAGTCGTTTACCGCGCCTGACGGGACGGCCATTCCTTACCCGCATGCGCCT GGCGTTCCGACCAGGCACACGCTCGGATGCAAGTGCTTCGCCGAATACAAGATCGATTTCGTAGCTCAGTTGGTGCGGTA G
Upstream 100 bases:
>100_bases ATGCGCATACAATTCGAATGCTCATGATCCCCTCCTATTCTCAATTCCTTGAGCAGAGAGACTTTAAGCTGGTGCTACAT TAGAGTCGAGAGAAAGTATA
Downstream 100 bases:
>100_bases TGGCCTCCTTTGCCGCGACGGTCGGCGCTTGGTGCCTGACGGTGCCGATCGCCGTCGAGATTGTGTTTAAGGAATCGGCA CAAGAGCTTGTTTCCCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MLVRLTPRQRFEILVSQFEPAVRAGFIEAIDDITSNIVLRRIVERLERGDINGAVNAMNLDPAAFRPLDEAIRAAFNGGG VATVDAMPTLRDPSGHRIVVRWDARNLAAEQWIQTHSSQLITGIVQDQQTAIRAALETGLARGENPTKTATAVIGKVSAV TGKREGGLIGLTTAQSEYIARARQELLTGEPDQLKAYLNRQRRDKRFDRTITAAIRDGKPIPTALVDRITGRYADSLLKL RVDTIGLHETFAALGASKDIAFRQQIEKGTLQAQHITKGWKHTPQEHGRMQHIAMQGQVVPFDQSFTAPDGTAIPYPHAP GVPTRHTLGCKCFAEYKIDFVAQLVR
Sequences:
>Translated_346_residues MLVRLTPRQRFEILVSQFEPAVRAGFIEAIDDITSNIVLRRIVERLERGDINGAVNAMNLDPAAFRPLDEAIRAAFNGGG VATVDAMPTLRDPSGHRIVVRWDARNLAAEQWIQTHSSQLITGIVQDQQTAIRAALETGLARGENPTKTATAVIGKVSAV TGKREGGLIGLTTAQSEYIARARQELLTGEPDQLKAYLNRQRRDKRFDRTITAAIRDGKPIPTALVDRITGRYADSLLKL RVDTIGLHETFAALGASKDIAFRQQIEKGTLQAQHITKGWKHTPQEHGRMQHIAMQGQVVPFDQSFTAPDGTAIPYPHAP GVPTRHTLGCKCFAEYKIDFVAQLVR >Mature_346_residues MLVRLTPRQRFEILVSQFEPAVRAGFIEAIDDITSNIVLRRIVERLERGDINGAVNAMNLDPAAFRPLDEAIRAAFNGGG VATVDAMPTLRDPSGHRIVVRWDARNLAAEQWIQTHSSQLITGIVQDQQTAIRAALETGLARGENPTKTATAVIGKVSAV TGKREGGLIGLTTAQSEYIARARQELLTGEPDQLKAYLNRQRRDKRFDRTITAAIRDGKPIPTALVDRITGRYADSLLKL RVDTIGLHETFAALGASKDIAFRQQIEKGTLQAQHITKGWKHTPQEHGRMQHIAMQGQVVPFDQSFTAPDGTAIPYPHAP GVPTRHTLGCKCFAEYKIDFVAQLVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38148; Mature: 38148
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVRLTPRQRFEILVSQFEPAVRAGFIEAIDDITSNIVLRRIVERLERGDINGAVNAMNL CEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC DPAAFRPLDEAIRAAFNGGGVATVDAMPTLRDPSGHRIVVRWDARNLAAEQWIQTHSSQL CHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH ITGIVQDQQTAIRAALETGLARGENPTKTATAVIGKVSAVTGKREGGLIGLTTAQSEYIA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHH RARQELLTGEPDQLKAYLNRQRRDKRFDRTITAAIRDGKPIPTALVDRITGRYADSLLKL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RVDTIGLHETFAALGASKDIAFRQQIEKGTLQAQHITKGWKHTPQEHGRMQHIAMQGQVV HHHHCCHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHCCCCCHHHCCCCHHHHCCCEEE PFDQSFTAPDGTAIPYPHAPGVPTRHTLGCKCFAEYKIDFVAQLVR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure MLVRLTPRQRFEILVSQFEPAVRAGFIEAIDDITSNIVLRRIVERLERGDINGAVNAMNL CEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC DPAAFRPLDEAIRAAFNGGGVATVDAMPTLRDPSGHRIVVRWDARNLAAEQWIQTHSSQL CHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH ITGIVQDQQTAIRAALETGLARGENPTKTATAVIGKVSAVTGKREGGLIGLTTAQSEYIA HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHH RARQELLTGEPDQLKAYLNRQRRDKRFDRTITAAIRDGKPIPTALVDRITGRYADSLLKL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RVDTIGLHETFAALGASKDIAFRQQIEKGTLQAQHITKGWKHTPQEHGRMQHIAMQGQVV HHHHCCHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHCCCCCHHHCCCCHHHHCCCEEE PFDQSFTAPDGTAIPYPHAPGVPTRHTLGCKCFAEYKIDFVAQLVR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA