Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is yfgE [C]

Identifier: 13476596

GI number: 13476596

Start: 6571232

End: 6571936

Strand: Direct

Name: yfgE [C]

Synonym: mlr7968

Alternate gene names: 13476596

Gene position: 6571232-6571936 (Clockwise)

Preceding gene: 13476595

Following gene: 13476599

Centisome position: 93.39

GC content: 70.07

Gene sequence:

>705_bases
GTGACCGCCCAGCGAACCGATCCGCCGCGCCAGCTGCCGCTCGATCTCGGCCACGGCACCGGCTATTCGCGCGACGAACT
CGTCGTCTCCGGCACCAACAACCAGGCGGCGGCGCTGGTCGACCGCTGGCCGGACTGGCCCTCGCCGGTGGTGGTGCTGG
CAGGTCCCGCCGGTTCCGGCAAGACGCATCTGGCCGCCATCTGGCGTGCGCGCGCCAACGCGGTTGCCGTCGACGCACGG
CGCATCGGCGACAGCATCGCCGGTCTCGGCGCCCGGCCGGCGCTGATCGACGATGTCGATGCCGGCGCGGTCGACGAACA
AGGCCTGTTCCATCTGATCAATGCGGTGCGCGGCGCAGGCTCGACGTTGCTGTTGACCGCACGGCGTTTTCCCTCGGCCT
GGGGCGTATCGCTGCCCGATCTGGCCTCGCGGCTGAAGGCGGCGGCGACGGTCGAGATCCACGAGCCCGACGACCTGCTG
CTCGCCGGTGTCATCACCAAGCTGTTCGCCGACCGCCAGGTCGAGGTCGAACCGCATGTCGTGCAATATCTGGTGCGGCG
CATCGAGCGCTCGCTGGCGACAGCCATGCGCGTGGTGGAGCGGCTGGACCGCACCGCGCTCGAGCGCAAGATGCCGATCA
CCCGGGCGCTCGCCGCCGAAACGGTCAGCGCCATGGATGAGGGGCAGCGCGAGTTCGAGATTTAG

Upstream 100 bases:

>100_bases
ATCTCGAATCGCCGCTCTACAAGGGCCACGCGACAGAGCCCGCGCCGCCGCTGCCGGCCGATCGCGGCGGCGGCCACCGC
ACCCAACCGCGTCGCTCGAA

Downstream 100 bases:

>100_bases
AAAGCCTCGGGCGACCGGCAACAGGGCGTGTCCCATTTTGGGAAAGAACAACTGGCACCCATCTTGCTGCACCAGCTTGC
CGGCTAACCCCGGTCCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Replication Initiation ATPase; DNAA-Related Protein; Regulatory Inactivation Of DNAA Hda Protein; DNAA-Like Protein; ATPase; Chromosomal Replication Initiator Protein DNAA; Chromosomal Replication Initiator; ATPase Involved In DNA Replication Initiation; DNAA Family Protein; Chromosomal Replication Initiator DNAa; DNA Replication Initiation Factor; Chromosomal DNA Replication Initiator-Related Protein; DNA Replication Initiation ATPase Protein; ATPase Involved In DNA Replication Initiation-Like Protein; DNAA-Like Protein Hda

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTAQRTDPPRQLPLDLGHGTGYSRDELVVSGTNNQAAALVDRWPDWPSPVVVLAGPAGSGKTHLAAIWRARANAVAVDAR
RIGDSIAGLGARPALIDDVDAGAVDEQGLFHLINAVRGAGSTLLLTARRFPSAWGVSLPDLASRLKAAATVEIHEPDDLL
LAGVITKLFADRQVEVEPHVVQYLVRRIERSLATAMRVVERLDRTALERKMPITRALAAETVSAMDEGQREFEI

Sequences:

>Translated_234_residues
MTAQRTDPPRQLPLDLGHGTGYSRDELVVSGTNNQAAALVDRWPDWPSPVVVLAGPAGSGKTHLAAIWRARANAVAVDAR
RIGDSIAGLGARPALIDDVDAGAVDEQGLFHLINAVRGAGSTLLLTARRFPSAWGVSLPDLASRLKAAATVEIHEPDDLL
LAGVITKLFADRQVEVEPHVVQYLVRRIERSLATAMRVVERLDRTALERKMPITRALAAETVSAMDEGQREFEI
>Mature_233_residues
TAQRTDPPRQLPLDLGHGTGYSRDELVVSGTNNQAAALVDRWPDWPSPVVVLAGPAGSGKTHLAAIWRARANAVAVDARR
IGDSIAGLGARPALIDDVDAGAVDEQGLFHLINAVRGAGSTLLLTARRFPSAWGVSLPDLASRLKAAATVEIHEPDDLLL
AGVITKLFADRQVEVEPHVVQYLVRRIERSLATAMRVVERLDRTALERKMPITRALAAETVSAMDEGQREFEI

Specific function: Unknown

COG id: COG0593

COG function: function code L; ATPase involved in DNA replication initiation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25229; Mature: 25098

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQRTDPPRQLPLDLGHGTGYSRDELVVSGTNNQAAALVDRWPDWPSPVVVLAGPAGSG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCEEEEECCCCCC
KTHLAAIWRARANAVAVDARRIGDSIAGLGARPALIDDVDAGAVDEQGLFHLINAVRGAG
CHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCC
STLLLTARRFPSAWGVSLPDLASRLKAAATVEIHEPDDLLLAGVITKLFADRQVEVEPHV
CEEEEEEHHCCCCCCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHH
VQYLVRRIERSLATAMRVVERLDRTALERKMPITRALAAETVSAMDEGQREFEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure 
TAQRTDPPRQLPLDLGHGTGYSRDELVVSGTNNQAAALVDRWPDWPSPVVVLAGPAGSG
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCEEEEECCCCCC
KTHLAAIWRARANAVAVDARRIGDSIAGLGARPALIDDVDAGAVDEQGLFHLINAVRGAG
CHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCC
STLLLTARRFPSAWGVSLPDLASRLKAAATVEIHEPDDLLLAGVITKLFADRQVEVEPHV
CEEEEEEHHCCCCCCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHH
VQYLVRRIERSLATAMRVVERLDRTALERKMPITRALAAETVSAMDEGQREFEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA