| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476447
Identifier: 13476447
GI number: 13476447
Start: 6435076
End: 6435654
Strand: Direct
Name: 13476447
Synonym: mlr7772
Alternate gene names: NA
Gene position: 6435076-6435654 (Clockwise)
Preceding gene: 13476446
Following gene: 13476448
Centisome position: 91.46
GC content: 62.18
Gene sequence:
>579_bases ATGGCGGCCGGCGTGGTTTCGGTCGCCTTGATCGTCGTCCGGCATTTCGGGGTGCTCAATCCGCTGTTTACGGACGAATC GACCGGCCGGATCCCGGTCTTCAACCTGTTGTTCCTTGCCTATCTCTTGCCGGCCGTAGCCGCCGGCGGACTGGCGCTCT ATGTCAGGGGCAAGCGGCCGAAATGGTATTCGGCAATGCTGGCACTGGTCGCGGCGCTGCTTGCCTTTGCGTATGCCACC CTGTCGGTCAGGCGGCTGTTCAAGGGTGAGTTCATCGGCCTGTGGAGTAGGCTTGGCCAGTTGGAGACCTACACCTATTC GGCGCTCTGGCTGGTGATCGGCGTGGCGCTGCTCACCGCCGGCGTCTGGCTGAAGTCGCAGGTGCTGCGCATTGCCTCGG CCGCGTTGATCGCTATCGCCGTGCTGAAGGTCTTCCTCTTCGACATGTCGGAACTGGAAGGCGTACTCAGGGCGATGTCC TTCATCGGTCTCGGCGCCGTGCTGATCGGCATCGGCCTGTTCTACCAGCGGCTTTTGACCAGCGCGGCGAAGGAGAAGAT ACCGGTCGTCGAACAATGA
Upstream 100 bases:
>100_bases ATGACGCTCGCCGAACAGGCGATCTACACGCTGATCGCCATCGGCGCCGGCGCCATCCTGGTCGCCATCGACATGCGCTC GCCAAGCTCGGTATGGTTCG
Downstream 100 bases:
>100_bases CGGCAGGAATTCAATCAAGCCGGGAATAAACCGGCACCCGCCAGCGTTATCTCATTGCTTGGGTGACCGGGGCGGCGGAC CGCTTCGCGCTGGCCGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MAAGVVSVALIVVRHFGVLNPLFTDESTGRIPVFNLLFLAYLLPAVAAGGLALYVRGKRPKWYSAMLALVAALLAFAYAT LSVRRLFKGEFIGLWSRLGQLETYTYSALWLVIGVALLTAGVWLKSQVLRIASAALIAIAVLKVFLFDMSELEGVLRAMS FIGLGAVLIGIGLFYQRLLTSAAKEKIPVVEQ
Sequences:
>Translated_192_residues MAAGVVSVALIVVRHFGVLNPLFTDESTGRIPVFNLLFLAYLLPAVAAGGLALYVRGKRPKWYSAMLALVAALLAFAYAT LSVRRLFKGEFIGLWSRLGQLETYTYSALWLVIGVALLTAGVWLKSQVLRIASAALIAIAVLKVFLFDMSELEGVLRAMS FIGLGAVLIGIGLFYQRLLTSAAKEKIPVVEQ >Mature_191_residues AAGVVSVALIVVRHFGVLNPLFTDESTGRIPVFNLLFLAYLLPAVAAGGLALYVRGKRPKWYSAMLALVAALLAFAYATL SVRRLFKGEFIGLWSRLGQLETYTYSALWLVIGVALLTAGVWLKSQVLRIASAALIAIAVLKVFLFDMSELEGVLRAMSF IGLGAVLIGIGLFYQRLLTSAAKEKIPVVEQ
Specific function: Unknown
COG id: COG5373
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20790; Mature: 20659
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGVVSVALIVVRHFGVLNPLFTDESTGRIPVFNLLFLAYLLPAVAAGGLALYVRGKRP CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCC KWYSAMLALVAALLAFAYATLSVRRLFKGEFIGLWSRLGQLETYTYSALWLVIGVALLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVWLKSQVLRIASAALIAIAVLKVFLFDMSELEGVLRAMSFIGLGAVLIGIGLFYQRLLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAKEKIPVVEQ HHHHHCCCCCCC >Mature Secondary Structure AAGVVSVALIVVRHFGVLNPLFTDESTGRIPVFNLLFLAYLLPAVAAGGLALYVRGKRP CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCC KWYSAMLALVAALLAFAYATLSVRRLFKGEFIGLWSRLGQLETYTYSALWLVIGVALLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVWLKSQVLRIASAALIAIAVLKVFLFDMSELEGVLRAMSFIGLGAVLIGIGLFYQRLLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAKEKIPVVEQ HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA