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The map label for this gene is omp2b [H]

Identifier: 13476424

GI number: 13476424

Start: 6410496

End: 6411650

Strand: Direct

Name: omp2b [H]

Synonym: mlr7740

Alternate gene names: 13476424

Gene position: 6410496-6411650 (Clockwise)

Preceding gene: 13476423

Following gene: 13476425

Centisome position: 91.11

GC content: 59.91

Gene sequence:

>1155_bases
ATGAACATCAAGAGCCTTCTTCTCGGCTCCGCTGCGGCCCTGATCGCAGTTTCCGGTGCGCGCGCCGCCGACGCCGTCGT
CGTCGCCGAGCCGGAACCCGCTGAATACGTCAAGATTTGCGACGTCTACGGCGCTGGCTACTTCTACATCCCCGGCACCG
AAACCTGCCTGCGCATCGGCGGCTATATCCGTTACGACATCGGCGTGGGCGACCGCGAAGGCGTGCAGAACGTTCAGGAT
CATCTGGATGGCGGCACCAACGACACCTACTACAAGCAGGCTCGTTTCGCGCTGAAGACCTGGACCGGCCAGGAAACCGA
GCTCGGCACGTTGAAGACCTACACCGAGACCCGCTTCAACTATGGCAACAGCAGCGGTGACTATACCGGCGTGCCGACGG
ACGTCGACAACAATCCGGCTACCCCGGACGTGCTGGTTTACCCTACCGGTTGGCAGGCGGGCAACAAGACCGTCTCGCTT
AACTTCGCCTGGATCCAGCTCGGTGGGCTGCGTGTCGGTAAGGACGAATCGGCCTTCAACACGTTCAGCGGTTACGCTGG
CGAGGTGATCGACGATACGCTCGTTCCCTACGGCAATTTCGACACCAACGTCATTCAGTACTATTTCGATGCTGGCAACG
GTTTCTCGGCCGTGGTCTCGCTCGAAGAAGGCGCTGGCACTGACACGATCGACAGCTATGTTCCGCATGTCGTCGGTGGC
GTGAAGTGGACCCAGGGCTGGGGTGGCATTTCGGGCGTCGTTGCATACGACAGCAACTATGAGGCTGTCTCGGGCAAGGT
TCGCCTGGACGTCACTGCGACCAACGAGCTCACGCTGTGGGTCATGGCCGGCTATGGCAACAAGTCTGACGTCGGCGACC
CGAATTCCGGTCACAACTTCTATAAGAACTGGGATGGAAGCTGGGCTGTTTGGGGCGGTGGCACCTACAAGTTCAACGAG
AAGACCTCGTTCAACGTCCAGGCGTCGTATGACGACGGCAAGACTTTCGGTCTGGCGGCCAACGTTGCCTATGAGGCCGC
TCCGGGCTTCAAGGTCGTGGCCGAAGTCGACTACTTCAACAAGGCGTCAGGCGATTTCCGTCCTGTCAAGGATGACGGTG
TCGGCGGTATCCTCCGCTTCCAGCGCTCCTTCTAA

Upstream 100 bases:

>100_bases
TGACGGCCTATGAGGCTATCTATCTGAGATAAAACGGAAAATGGCCATTCGAGCTGCTTTTAGCTGACCTCCGCTCTCGA
TTCTGACTGGAGGTCAGAAA

Downstream 100 bases:

>100_bases
GGGCTGGTTCCTTACAGGTGAAATCCAGCCCGGGCGAACAAACGCCCGGGCTGTTTTTGTTTCGTGACTGGGCTTTGGGA
AACAGAAGGAACAGGGGGGG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MNIKSLLLGSAAALIAVSGARAADAVVVAEPEPAEYVKICDVYGAGYFYIPGTETCLRIGGYIRYDIGVGDREGVQNVQD
HLDGGTNDTYYKQARFALKTWTGQETELGTLKTYTETRFNYGNSSGDYTGVPTDVDNNPATPDVLVYPTGWQAGNKTVSL
NFAWIQLGGLRVGKDESAFNTFSGYAGEVIDDTLVPYGNFDTNVIQYYFDAGNGFSAVVSLEEGAGTDTIDSYVPHVVGG
VKWTQGWGGISGVVAYDSNYEAVSGKVRLDVTATNELTLWVMAGYGNKSDVGDPNSGHNFYKNWDGSWAVWGGGTYKFNE
KTSFNVQASYDDGKTFGLAANVAYEAAPGFKVVAEVDYFNKASGDFRPVKDDGVGGILRFQRSF

Sequences:

>Translated_384_residues
MNIKSLLLGSAAALIAVSGARAADAVVVAEPEPAEYVKICDVYGAGYFYIPGTETCLRIGGYIRYDIGVGDREGVQNVQD
HLDGGTNDTYYKQARFALKTWTGQETELGTLKTYTETRFNYGNSSGDYTGVPTDVDNNPATPDVLVYPTGWQAGNKTVSL
NFAWIQLGGLRVGKDESAFNTFSGYAGEVIDDTLVPYGNFDTNVIQYYFDAGNGFSAVVSLEEGAGTDTIDSYVPHVVGG
VKWTQGWGGISGVVAYDSNYEAVSGKVRLDVTATNELTLWVMAGYGNKSDVGDPNSGHNFYKNWDGSWAVWGGGTYKFNE
KTSFNVQASYDDGKTFGLAANVAYEAAPGFKVVAEVDYFNKASGDFRPVKDDGVGGILRFQRSF
>Mature_384_residues
MNIKSLLLGSAAALIAVSGARAADAVVVAEPEPAEYVKICDVYGAGYFYIPGTETCLRIGGYIRYDIGVGDREGVQNVQD
HLDGGTNDTYYKQARFALKTWTGQETELGTLKTYTETRFNYGNSSGDYTGVPTDVDNNPATPDVLVYPTGWQAGNKTVSL
NFAWIQLGGLRVGKDESAFNTFSGYAGEVIDDTLVPYGNFDTNVIQYYFDAGNGFSAVVSLEEGAGTDTIDSYVPHVVGG
VKWTQGWGGISGVVAYDSNYEAVSGKVRLDVTATNELTLWVMAGYGNKSDVGDPNSGHNFYKNWDGSWAVWGGGTYKFNE
KTSFNVQASYDDGKTFGLAANVAYEAAPGFKVVAEVDYFNKASGDFRPVKDDGVGGILRFQRSF

Specific function: Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alphaproteobacteria porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003684 [H]

Pfam domain/function: PF02530 Porin_2 [H]

EC number: NA

Molecular weight: Translated: 41390; Mature: 41390

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKSLLLGSAAALIAVSGARAADAVVVAEPEPAEYVKICDVYGAGYFYIPGTETCLRIG
CCHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCCEEEECCCHHHHHCC
GYIRYDIGVGDREGVQNVQDHLDGGTNDTYYKQARFALKTWTGQETELGTLKTYTETRFN
CEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHEEEEEEECCCCCCCCCEEEEEEHHEEC
YGNSSGDYTGVPTDVDNNPATPDVLVYPTGWQAGNKTVSLNFAWIQLGGLRVGKDESAFN
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEECCEEECCCCCCCC
TFSGYAGEVIDDTLVPYGNFDTNVIQYYFDAGNGFSAVVSLEEGAGTDTIDSYVPHVVGG
CCCCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCC
VKWTQGWGGISGVVAYDSNYEAVSGKVRLDVTATNELTLWVMAGYGNKSDVGDPNSGHNF
CEEECCCCCCEEEEEECCCCEEECCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCC
YKNWDGSWAVWGGGTYKFNEKTSFNVQASYDDGKTFGLAANVAYEAAPGFKVVAEVDYFN
CCCCCCCEEEECCEEEEECCCCEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEEECCC
KASGDFRPVKDDGVGGILRFQRSF
CCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MNIKSLLLGSAAALIAVSGARAADAVVVAEPEPAEYVKICDVYGAGYFYIPGTETCLRIG
CCHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCCEEEECCCHHHHHCC
GYIRYDIGVGDREGVQNVQDHLDGGTNDTYYKQARFALKTWTGQETELGTLKTYTETRFN
CEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHEEEEEEECCCCCCCCCEEEEEEHHEEC
YGNSSGDYTGVPTDVDNNPATPDVLVYPTGWQAGNKTVSLNFAWIQLGGLRVGKDESAFN
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEECCEEECCCCCCCC
TFSGYAGEVIDDTLVPYGNFDTNVIQYYFDAGNGFSAVVSLEEGAGTDTIDSYVPHVVGG
CCCCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCC
VKWTQGWGGISGVVAYDSNYEAVSGKVRLDVTATNELTLWVMAGYGNKSDVGDPNSGHNF
CEEECCCCCCEEEEEECCCCEEECCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCC
YKNWDGSWAVWGGGTYKFNEKTSFNVQASYDDGKTFGLAANVAYEAAPGFKVVAEVDYFN
CCCCCCCEEEECCEEEEECCCCEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEEECCC
KASGDFRPVKDDGVGGILRFQRSF
CCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2509359 [H]