| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13476423
Identifier: 13476423
GI number: 13476423
Start: 6409884
End: 6410075
Strand: Direct
Name: 13476423
Synonym: msr7739
Alternate gene names: NA
Gene position: 6409884-6410075 (Clockwise)
Preceding gene: 13476420
Following gene: 13476424
Centisome position: 91.1
GC content: 58.33
Gene sequence:
>192_bases ATGACACGATTTGGCCTCACTCAGAAAGCTCTCGTTAACCATCTGGCCGGTCGCAGCCGCCCATTTCCAGCCGAATCCGG CAACCGGCTGACGGAATCAAGGCAAGGCCGCGAGTCACTAGCCAGGGATTTGCCGCAGAACCGCCGCAGCTGGGAAAGCC ACGGCGCAGCATGCGGTTATTTTTCGACATAA
Upstream 100 bases:
>100_bases CTCCTTCGAATTCGACATTACCCATGAGGCGGCGGCGTTCAACAACGATCGTACCGACGAAAGGGCTGTTCGGCTGCTAT CCCCCAGCGTTGTTGCACAA
Downstream 100 bases:
>100_bases TGATTTCTTTTTCCGAGATAATGGTCGGGGCTTGTTGATTGTGCCGGCGCTTTTCTTTATCCAGCGGCGCAACGGAGAGG TGGCCGAGTGGTCGAAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MTRFGLTQKALVNHLAGRSRPFPAESGNRLTESRQGRESLARDLPQNRRSWESHGAACGYFST
Sequences:
>Translated_63_residues MTRFGLTQKALVNHLAGRSRPFPAESGNRLTESRQGRESLARDLPQNRRSWESHGAACGYFST >Mature_62_residues TRFGLTQKALVNHLAGRSRPFPAESGNRLTESRQGRESLARDLPQNRRSWESHGAACGYFST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7062; Mature: 6931
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFGLTQKALVNHLAGRSRPFPAESGNRLTESRQGRESLARDLPQNRRSWESHGAACGY CCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC FST CCC >Mature Secondary Structure TRFGLTQKALVNHLAGRSRPFPAESGNRLTESRQGRESLARDLPQNRRSWESHGAACGY CCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC FST CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA