Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is wxcX [H]

Identifier: 13476281

GI number: 13476281

Start: 6243553

End: 6245466

Strand: Direct

Name: wxcX [H]

Synonym: mlr7560

Alternate gene names: 13476281

Gene position: 6243553-6245466 (Clockwise)

Preceding gene: 13476280

Following gene: 13476282

Centisome position: 88.74

GC content: 51.83

Gene sequence:

>1914_bases
GTGCGTCGTATTGCCGTATTTTCTCTCTACAACGAGCATGGAATTGCCGATGACTATGTCATCTTCCTGCTCGAAAAGCT
GCGCGAGTTTGTCGAGAGGATTGTTGTCGTATCCAACGGAAATCTTTCCAAGCTTTCGGAAATAGCAATCAAAGCCAGTT
GTGATCAGCTTCTGGTCCGGGAGAACGTGGGATTTGACGTATGGGGATACAAGACCGGTATCGACGCTGTCGGCTTTGAC
GCTCTTTCCGAGTATGATGAACTTATCCTGCTGAATGACACTTGCTACGGGCCTCTTTTCCCGTTTTCGGAAATGTTTTC
TGAAATGGAGCGCCGGGATTGTGATTTCTGGGGCAGCGCTGCCCATTCGAAAATGACGCCAAATCCGTTTACCGGAACGG
GCCATCTGCCTCGCCACCTCACAGCAAACTTCATTGCTGTCCGCGAGAAGATGTTGAAATCACGCGCCTTCAAAACATAC
TGGGAAAATCTGCCGGCGATCAAAACTTACATCGACGCTATCATGCTTCACGAGTCGCAGTTTACCAAGCATTTTACAGA
TCTTGGCTACTCGGCGGAAGCGTATGTTGATCCGGATAAGTATGGCTCGCACTATCCGGCGTTTATTAACGTGGATGAGA
CAATCATCAACCGCTTCCCCTTGCTAAAGCGACGTCCGTTTTTTCATGATCCGACGTTTTTGAATGCTCAAGGCATTGAT
TTGCCGCGCGCTTTGCGAGTTCTTGAGGAGACATCCGACTACGACCTCAATCTGATTTGGCGCAATGTCCTGCGCACTTC
GGAATTGAGGAATCTAAACACGAATGCCGCGCTGATGAGCGTCTTGCCCGATGAGCGAGCCAAAGACGATGACGCTCCTT
CCGACTACGGCAAGATCGCTGTCTGCGCGCATATCTACTACACCGATATGCTGGAAGAGATACTGGCGCTGACCGGCAAC
ATCCCGGTTCCCTATGATTTCATTGCCACGACGGATACGCCGGATAAAAAGGCCGAGATTGAAGCCACACTGGCAAAACG
CCCTGGCGTGAAGAACGTCATCGTCCGCGTGGTCGAGAAAAATCGCGGTCGTGACATGTCCTCGCTTTTCATTTCCTTGC
GCGATCTGCTCGTCGACGACCGTTATGACCTTGTGTGTCGCCTGCATACAAAAAAGTCGCCTCAAGTGCAGGCGTCGAGA
AGCAACCTGTTCAAGCGGCATATGCTTGAGAACTTGCTGAATACGCGTGGCTATGTCCACAATGTTTTGGATATGTTTCA
CGACAATCCGTCAGTCGGACTAGCCGTTCCGCCTGTCGTTCATATTTCCTATCCGACGATGGGGCACGCATGGTTCTTCA
ACAGACCAAAGGTTGAGGAAACCGCGCGGCTTTTGAACATCAAGGTCAAGTTCGATCATGACACCCCGGTGGCTGCCTAT
GGCACCATGTTCTGGTTTCGGCCACGCGCCCTGCGCAAGATGTTCGAACACAAGTGGAAATGGGAAGACTTCAATGCCGA
GCCAAATCATGTTGACGGCGGCTTGGCTCATGTGCTGGAGCGGCTGATCGCCTATGCGGCTCAGGACGCTGGATATACCA
CGCGGCACATCATGTGCGCGCATCAGGCGGCGCACAATTACACCATGCTGGAGTTCAAGCTGCAAAAACTTGCCAGCCTG
ATGCCGTCAGGCGACTTTCCGTGGCAGTGCCATTTGTTGTCTGAGTGGAAGAAGGCCGGTTATCCCGTGGCAAACCATCT
ACCGTCCGCTCTGTCATCGTCGCAGACGTCGGTAACGTCAGTGAAGCGCTCTCTGGGTAAACTCAATTTGGCCATTAAAA
ACTCTCTGTGGTTCAGAGCGCCTACCCTGTTCAAAATACTGAGACCGATCTATCGAGCTGTGGCCAAGCCCTAA

Upstream 100 bases:

>100_bases
GCGGCACGAGGGCGATCCTGAAACCGAACTCTCGGCGTAGTGGCGGATGATGGCGAGCATCAGACACGTAAGGTTCACGG
TCTAGTCAGGAGCATCAAGG

Downstream 100 bases:

>100_bases
AATCAAACTCTAGCCATGGCGAAAACGCCGTGCGCTTTTTCCTGGAAGGCGGGCCTCATATGGCAAGCCGCCGCGTAGAA
GATCGCATGTGGCCGGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MRRIAVFSLYNEHGIADDYVIFLLEKLREFVERIVVVSNGNLSKLSEIAIKASCDQLLVRENVGFDVWGYKTGIDAVGFD
ALSEYDELILLNDTCYGPLFPFSEMFSEMERRDCDFWGSAAHSKMTPNPFTGTGHLPRHLTANFIAVREKMLKSRAFKTY
WENLPAIKTYIDAIMLHESQFTKHFTDLGYSAEAYVDPDKYGSHYPAFINVDETIINRFPLLKRRPFFHDPTFLNAQGID
LPRALRVLEETSDYDLNLIWRNVLRTSELRNLNTNAALMSVLPDERAKDDDAPSDYGKIAVCAHIYYTDMLEEILALTGN
IPVPYDFIATTDTPDKKAEIEATLAKRPGVKNVIVRVVEKNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQASR
SNLFKRHMLENLLNTRGYVHNVLDMFHDNPSVGLAVPPVVHISYPTMGHAWFFNRPKVEETARLLNIKVKFDHDTPVAAY
GTMFWFRPRALRKMFEHKWKWEDFNAEPNHVDGGLAHVLERLIAYAAQDAGYTTRHIMCAHQAAHNYTMLEFKLQKLASL
MPSGDFPWQCHLLSEWKKAGYPVANHLPSALSSSQTSVTSVKRSLGKLNLAIKNSLWFRAPTLFKILRPIYRAVAKP

Sequences:

>Translated_637_residues
MRRIAVFSLYNEHGIADDYVIFLLEKLREFVERIVVVSNGNLSKLSEIAIKASCDQLLVRENVGFDVWGYKTGIDAVGFD
ALSEYDELILLNDTCYGPLFPFSEMFSEMERRDCDFWGSAAHSKMTPNPFTGTGHLPRHLTANFIAVREKMLKSRAFKTY
WENLPAIKTYIDAIMLHESQFTKHFTDLGYSAEAYVDPDKYGSHYPAFINVDETIINRFPLLKRRPFFHDPTFLNAQGID
LPRALRVLEETSDYDLNLIWRNVLRTSELRNLNTNAALMSVLPDERAKDDDAPSDYGKIAVCAHIYYTDMLEEILALTGN
IPVPYDFIATTDTPDKKAEIEATLAKRPGVKNVIVRVVEKNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQASR
SNLFKRHMLENLLNTRGYVHNVLDMFHDNPSVGLAVPPVVHISYPTMGHAWFFNRPKVEETARLLNIKVKFDHDTPVAAY
GTMFWFRPRALRKMFEHKWKWEDFNAEPNHVDGGLAHVLERLIAYAAQDAGYTTRHIMCAHQAAHNYTMLEFKLQKLASL
MPSGDFPWQCHLLSEWKKAGYPVANHLPSALSSSQTSVTSVKRSLGKLNLAIKNSLWFRAPTLFKILRPIYRAVAKP
>Mature_637_residues
MRRIAVFSLYNEHGIADDYVIFLLEKLREFVERIVVVSNGNLSKLSEIAIKASCDQLLVRENVGFDVWGYKTGIDAVGFD
ALSEYDELILLNDTCYGPLFPFSEMFSEMERRDCDFWGSAAHSKMTPNPFTGTGHLPRHLTANFIAVREKMLKSRAFKTY
WENLPAIKTYIDAIMLHESQFTKHFTDLGYSAEAYVDPDKYGSHYPAFINVDETIINRFPLLKRRPFFHDPTFLNAQGID
LPRALRVLEETSDYDLNLIWRNVLRTSELRNLNTNAALMSVLPDERAKDDDAPSDYGKIAVCAHIYYTDMLEEILALTGN
IPVPYDFIATTDTPDKKAEIEATLAKRPGVKNVIVRVVEKNRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQASR
SNLFKRHMLENLLNTRGYVHNVLDMFHDNPSVGLAVPPVVHISYPTMGHAWFFNRPKVEETARLLNIKVKFDHDTPVAAY
GTMFWFRPRALRKMFEHKWKWEDFNAEPNHVDGGLAHVLERLIAYAAQDAGYTTRHIMCAHQAAHNYTMLEFKLQKLASL
MPSGDFPWQCHLLSEWKKAGYPVANHLPSALSSSQTSVTSVKRSLGKLNLAIKNSLWFRAPTLFKILRPIYRAVAKP

Specific function: Unknown

COG id: COG3754

COG function: function code M; Lipopolysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007739 [H]

Pfam domain/function: PF05045 RgpF [H]

EC number: NA

Molecular weight: Translated: 72974; Mature: 72974

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIAVFSLYNEHGIADDYVIFLLEKLREFVERIVVVSNGNLSKLSEIAIKASCDQLLVR
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHH
ENVGFDVWGYKTGIDAVGFDALSEYDELILLNDTCYGPLFPFSEMFSEMERRDCDFWGSA
HCCCCEECCCCCCCCHHCHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC
AHSKMTPNPFTGTGHLPRHLTANFIAVREKMLKSRAFKTYWENLPAIKTYIDAIMLHESQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FTKHFTDLGYSAEAYVDPDKYGSHYPAFINVDETIINRFPLLKRRPFFHDPTFLNAQGID
HHHHHHHCCCCCEEEECHHHCCCCCCEEEECCHHHHHHCCHHHCCCCCCCCCCCCCCCCC
LPRALRVLEETSDYDLNLIWRNVLRTSELRNLNTNAALMSVLPDERAKDDDAPSDYGKIA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCEE
VCAHIYYTDMLEEILALTGNIPVPYDFIATTDTPDKKAEIEATLAKRPGVKNVIVRVVEK
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
NRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQASRSNLFKRHMLENLLNTRGYVH
CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
NVLDMFHDNPSVGLAVPPVVHISYPTMGHAWFFNRPKVEETARLLNIKVKFDHDTPVAAY
HHHHHHCCCCCCCEECCCEEEEECCCCCCEEECCCCCHHHHHHEEEEEEEECCCCCHHHH
GTMFWFRPRALRKMFEHKWKWEDFNAEPNHVDGGLAHVLERLIAYAAQDAGYTTRHIMCA
HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
HQAAHNYTMLEFKLQKLASLMPSGDFPWQCHLLSEWKKAGYPVANHLPSALSSSQTSVTS
HHHHCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH
VKRSLGKLNLAIKNSLWFRAPTLFKILRPIYRAVAKP
HHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRIAVFSLYNEHGIADDYVIFLLEKLREFVERIVVVSNGNLSKLSEIAIKASCDQLLVR
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHH
ENVGFDVWGYKTGIDAVGFDALSEYDELILLNDTCYGPLFPFSEMFSEMERRDCDFWGSA
HCCCCEECCCCCCCCHHCHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC
AHSKMTPNPFTGTGHLPRHLTANFIAVREKMLKSRAFKTYWENLPAIKTYIDAIMLHESQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FTKHFTDLGYSAEAYVDPDKYGSHYPAFINVDETIINRFPLLKRRPFFHDPTFLNAQGID
HHHHHHHCCCCCEEEECHHHCCCCCCEEEECCHHHHHHCCHHHCCCCCCCCCCCCCCCCC
LPRALRVLEETSDYDLNLIWRNVLRTSELRNLNTNAALMSVLPDERAKDDDAPSDYGKIA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCEE
VCAHIYYTDMLEEILALTGNIPVPYDFIATTDTPDKKAEIEATLAKRPGVKNVIVRVVEK
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
NRGRDMSSLFISLRDLLVDDRYDLVCRLHTKKSPQVQASRSNLFKRHMLENLLNTRGYVH
CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
NVLDMFHDNPSVGLAVPPVVHISYPTMGHAWFFNRPKVEETARLLNIKVKFDHDTPVAAY
HHHHHHCCCCCCCEECCCEEEEECCCCCCEEECCCCCHHHHHHEEEEEEEECCCCCHHHH
GTMFWFRPRALRKMFEHKWKWEDFNAEPNHVDGGLAHVLERLIAYAAQDAGYTTRHIMCA
HHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
HQAAHNYTMLEFKLQKLASLMPSGDFPWQCHLLSEWKKAGYPVANHLPSALSSSQTSVTS
HHHHCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH
VKRSLGKLNLAIKNSLWFRAPTLFKILRPIYRAVAKP
HHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]