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The map label for this gene is glyQ

Identifier: 13476181

GI number: 13476181

Start: 6142652

End: 6143596

Strand: Direct

Name: glyQ

Synonym: mlr7434

Alternate gene names: 13476181

Gene position: 6142652-6143596 (Clockwise)

Preceding gene: 13476179

Following gene: 13476182

Centisome position: 87.3

GC content: 63.07

Gene sequence:

>945_bases
GTGACGATTGAAATCCCTGCCCATATGCACCCCAGCCGCTCGTTCCAGGGGCTGATCCTGACCTTGCACAATTACTGGGC
GGCCTATGGTTGCGTCATCCTCCAGCCCTACGACATGGAGGTCGGCGCCGGCACGTTTCATCCGGCAACGACGCTGCGCG
CGCTCGGGCCGAAGCGCTGGAACGCCGCCTATGTCCAGCCCTCGCGCCGCCCCAAGGATGGCCGCTATGGCGAGAACCCG
AACCGGCTGCAGCATTATTACCAGTACCAGGTGATCCTGAAGCCGAACCCGCCGAACCTGCAGGAGCTCTATCTCGGCTC
ACTGGCGGCGATCGGCGTCGACCCGCTGCTGCATGACATCCGCTTCGTCGAGGACGACTGGGAAAGCCCGACGCTCGGCG
CTTGGGGGCTTGGCTGGGAATGCTGGTGCGACGGCATGGAAGTCTCGCAGTTCACCTATTTCCAGCAGGTCTGCGGCATC
GAATGCGCGCCGGTGGCGGGCGAACTAACCTACGGGCTGGAGCGGCTGGCTATGTATGTGCAGGGCGTCGACAATGTCTA
CGACCTCAACTTCAACGGTCGCGAGGGCGCCGACAAGGTGACCTATGGCGACGTCTTCCTGCAGGCCGAGCAGGAATATT
CGCGCCACAATTTCGAATACGCCGACACGGCGATGCTGCTCAGGCATTTCGAAGACGCCGAGGCCGAGTGCAAGGCTCTG
CTCGATGCCGGCGCACCGGCGTCGAACGACAATCTGCCGATGCACAAGATGGTCTTTCCGGCCTACGACCAGTGCATCAA
GGCCAGCCATGTCTTCAACCTGCTCGACGCGCGCGGCGTGATCTCGGTCACCGAGCGGCAGAGTTACATCCTGCGCGTGC
GCAATCTGGCGAAGGCCTGCGGCGAGGCGTTTTTGAAGACCCAGGCCGGTGGGTTGGCTGCCTGA

Upstream 100 bases:

>100_bases
ATACCCATAGAGGCTCGCATCCGGCGTGCCCTTGCTTGACGCTTCGCCGCCGTGTCTCTAGGACGTGCCGGCAAGCTAGC
CTTTGATGTCGAGGCCACCC

Downstream 100 bases:

>100_bases
GCTTCAGGCAGACCTCATCGTCTCGAGGGAAGCGTTGATCGGTGACAGGATCTGGCCGCTCGGGCCAGCCATTGTCCTTA
ACGCCTGCCTCACACCCGGC

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTIEIPAHMHPSRSFQGLILTLHNYWAAYGCVILQPYDMEVGAGTFHPATTLRALGPKRWNAAYVQPSRRPKDGRYGENP
NRLQHYYQYQVILKPNPPNLQELYLGSLAAIGVDPLLHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVCGI
ECAPVAGELTYGLERLAMYVQGVDNVYDLNFNGREGADKVTYGDVFLQAEQEYSRHNFEYADTAMLLRHFEDAEAECKAL
LDAGAPASNDNLPMHKMVFPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRNLAKACGEAFLKTQAGGLAA

Sequences:

>Translated_314_residues
MTIEIPAHMHPSRSFQGLILTLHNYWAAYGCVILQPYDMEVGAGTFHPATTLRALGPKRWNAAYVQPSRRPKDGRYGENP
NRLQHYYQYQVILKPNPPNLQELYLGSLAAIGVDPLLHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVCGI
ECAPVAGELTYGLERLAMYVQGVDNVYDLNFNGREGADKVTYGDVFLQAEQEYSRHNFEYADTAMLLRHFEDAEAECKAL
LDAGAPASNDNLPMHKMVFPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRNLAKACGEAFLKTQAGGLAA
>Mature_313_residues
TIEIPAHMHPSRSFQGLILTLHNYWAAYGCVILQPYDMEVGAGTFHPATTLRALGPKRWNAAYVQPSRRPKDGRYGENPN
RLQHYYQYQVILKPNPPNLQELYLGSLAAIGVDPLLHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVCGIE
CAPVAGELTYGLERLAMYVQGVDNVYDLNFNGREGADKVTYGDVFLQAEQEYSRHNFEYADTAMLLRHFEDAEAECKALL
DAGAPASNDNLPMHKMVFPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRNLAKACGEAFLKTQAGGLAA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=294, Percent_Identity=65.9863945578231, Blast_Score=393, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_RHILO (Q986B6)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_107751.1
- ProteinModelPortal:   Q986B6
- GeneID:   1230406
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr7434
- NMPDR:   fig|266835.1.peg.5852
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- ProtClustDB:   PRK09348
- BRENDA:   6.1.1.14
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 35267; Mature: 35136

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIEIPAHMHPSRSFQGLILTLHNYWAAYGCVILQPYDMEVGAGTFHPATTLRALGPKRW
CEEEECCCCCCCCCCCCEEEHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHCCCCCC
NAAYVQPSRRPKDGRYGENPNRLQHYYQYQVILKPNPPNLQELYLGSLAAIGVDPLLHDI
CEEEECCCCCCCCCCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHH
RFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVCGIECAPVAGELTYGLERLAMYV
HHHHCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
QGVDNVYDLNFNGREGADKVTYGDVFLQAEQEYSRHNFEYADTAMLLRHFEDAEAECKAL
HCCCCEEECCCCCCCCCCCEEECCEEEEEHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
LDAGAPASNDNLPMHKMVFPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRNLAKAC
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHH
GEAFLKTQAGGLAA
HHHHHHHCCCCCCC
>Mature Secondary Structure 
TIEIPAHMHPSRSFQGLILTLHNYWAAYGCVILQPYDMEVGAGTFHPATTLRALGPKRW
EEEECCCCCCCCCCCCEEEHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHCCCCCC
NAAYVQPSRRPKDGRYGENPNRLQHYYQYQVILKPNPPNLQELYLGSLAAIGVDPLLHDI
CEEEECCCCCCCCCCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHH
RFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVCGIECAPVAGELTYGLERLAMYV
HHHHCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
QGVDNVYDLNFNGREGADKVTYGDVFLQAEQEYSRHNFEYADTAMLLRHFEDAEAECKAL
HCCCCEEECCCCCCCCCCCEEECCEEEEEHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
LDAGAPASNDNLPMHKMVFPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRNLAKAC
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHH
GEAFLKTQAGGLAA
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968