| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476179
Identifier: 13476179
GI number: 13476179
Start: 6140025
End: 6141914
Strand: Direct
Name: 13476179
Synonym: mlr7432
Alternate gene names: NA
Gene position: 6140025-6141914 (Clockwise)
Preceding gene: 13476178
Following gene: 13476181
Centisome position: 87.26
GC content: 63.28
Gene sequence:
>1890_bases GTGAATTTCAGGCGGATTGAAGCGCGACCCCAAAAAGGCCATGCTTTGCCCGGAAAGATCGAGTCTACGTCGATCCCGCT GACGCGGAGATGGCGCCTGGCTGAAAGGGATACGATGGAGCAAGGACGTGCGCGCTGGCTGACAAGGCTGGCAATTGTGA CGGGCATGGCGATTTCGGCTTTGCCGGCCTATGCCAAGCAATCCACCGAACCGGTCAAGATCTCGTCGTTCTCGGGCGCC TATCTGGCAGCCCGGATCGCCGAAGGCGACAACGACCTCGACAGCGCCATCGCCTATTACAAGCAGGCCCTGGCCTTCGA TCCGAGCGACACCGGCCTGCAGCAGAGCCTGATGTTGTCGCTGATCGCGCAAGGTCGCTTCGACGAATCCCTGGTCTATG CCGACAAGCTCAAGGAAGTGCCCGATGTCGAGCGCTTCTCGCGCCTGGCGCTGGCCGTCGATTCTTTCCACAAGAAGGAT TTCACCAAGGCCCAGTACTGGCTGAAGCTGTCACTCGAATCCGACCTTGACCGGCTGATTTCCGGCGTCATGTCCGGCTG GGCCGAACAGGGTGCTGGCCAAGCCGGCGACGCGATGGCTTCGATCGACAAGCTTCAGGGCCCGGACTGGTTCGGCCTGT TCAAATCCTTCCACCGCGCCCTGATCGCTGATGCCTCCAACATGCCCGAAAAGGCCGAGGCGATATACGCCGCGACGATG CAGGATACCGCCGCCGGCGGTGCCGCGCCCGAAACCTGGATGCGCAACGCGCAGGCCTATGCCTCGTTCCTGGCCCGCAA GGGCGACAAGGCCAAGGCGATCTCGGTGCTCGACCAGGCCGAGGCGTTTTCGCCGGGTAAGCTCGAAATCGTCGCCTTGC GGGACAGGATTAGCAAGGGCGACAAGATCGCGCCCTTCGTTTCCGGTCCGTCCGACGGTGCTTCCGAAATCCTGCTCGAC CTCGCCACCGCGCTCAACCGGGGCGGCGGCGAGCCGTTCGTTCGCCTCTATCTGCAATATGCGCTCGCCCTGCGGCCTGA CAGCGACGCGGCTCTCGTGCAGCTCGCCGCCGTCGCCGAACAGCTGAAGGACGGCGAGGGCGCCATCGCGCTCTATCGGC GGATCCCCGATTCTTCGCCGCTGAAGGAGCTTTCGGACCTGCAGCTTGGCCTCAACCTTGCCGATCTCGACCGCCATGAC GAGGCGATCACCCATCTGAAGGCCTTCGTCGACGCTCATCCCAACGACATGCGCGCCTATCTGGCGCTTGGTGGGGTCTA TTCCTCGAAGGAGGATTTCCGCTCGGCCGCCAGCCTCTACGACAAGGCCGTCGAGGCGCTGAAGACGCCGACCGCTGCCA ACTGGAACATCTTCTACCAGCGCGGCATCGCCTATGAGCGGCTGAAGGAATGGCCGAAGGCCGAGCCGAATTTCCGCAAG GCGCTGGAACTGCAGCCGGACCAGCCGCAGGTGCTGAACTATCTCGGCTATTCCTGGGTCGACATGAACACCAACCTGAA GGAAGGCCTGGCGATGATCCAGAAGGCCGTCGACCTCAGGCCGAGCGACGGTTACATCGTTGATTCGCTGGGCTGGGCCT ATTTCCGCCTCGGCCGCTTCGATGACGCGGTGCGCGAGATGGAACGCGCCGTATCGCTGAAGCCGGAAGATCCGGTTCTC AACGACCATCTCGGCGACGCCTACTGGCGCGTCGGCCGCAAGCTGGAAGCCACCTTCCAGTGGAACCAGGCGCGTGACCT GAAGCCCGATCCCGACGTGCTGGCCACCTTGCAGCAGAAGCTGATGAAGGGCCTGCCGCCGATCGAATCCAACACGGCGC AGGAGACCCCCAAGGTCAAGCCCGAGCCGGTGCCTGTTCCGAAGGGGTGA
Upstream 100 bases:
>100_bases GAAGGTGCAGCGATCCGTCCTGCAGGACTGACCTTGACGCCGGCTTTTCCACGGTCGAAAATCCCCTCCAGCCATGGTTT GTTAATCGGCTGGCCCGATT
Downstream 100 bases:
>100_bases GACCGGCTATTTGAATGCGAACGGGGCTCTTTTCAGGGCCCCGTTTTCGTTTTGGAGGGTGTCGATGCACAGCTCGCTCA GAAGAGCTTCCGGTAGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MNFRRIEARPQKGHALPGKIESTSIPLTRRWRLAERDTMEQGRARWLTRLAIVTGMAISALPAYAKQSTEPVKISSFSGA YLAARIAEGDNDLDSAIAYYKQALAFDPSDTGLQQSLMLSLIAQGRFDESLVYADKLKEVPDVERFSRLALAVDSFHKKD FTKAQYWLKLSLESDLDRLISGVMSGWAEQGAGQAGDAMASIDKLQGPDWFGLFKSFHRALIADASNMPEKAEAIYAATM QDTAAGGAAPETWMRNAQAYASFLARKGDKAKAISVLDQAEAFSPGKLEIVALRDRISKGDKIAPFVSGPSDGASEILLD LATALNRGGGEPFVRLYLQYALALRPDSDAALVQLAAVAEQLKDGEGAIALYRRIPDSSPLKELSDLQLGLNLADLDRHD EAITHLKAFVDAHPNDMRAYLALGGVYSSKEDFRSAASLYDKAVEALKTPTAANWNIFYQRGIAYERLKEWPKAEPNFRK ALELQPDQPQVLNYLGYSWVDMNTNLKEGLAMIQKAVDLRPSDGYIVDSLGWAYFRLGRFDDAVREMERAVSLKPEDPVL NDHLGDAYWRVGRKLEATFQWNQARDLKPDPDVLATLQQKLMKGLPPIESNTAQETPKVKPEPVPVPKG
Sequences:
>Translated_629_residues MNFRRIEARPQKGHALPGKIESTSIPLTRRWRLAERDTMEQGRARWLTRLAIVTGMAISALPAYAKQSTEPVKISSFSGA YLAARIAEGDNDLDSAIAYYKQALAFDPSDTGLQQSLMLSLIAQGRFDESLVYADKLKEVPDVERFSRLALAVDSFHKKD FTKAQYWLKLSLESDLDRLISGVMSGWAEQGAGQAGDAMASIDKLQGPDWFGLFKSFHRALIADASNMPEKAEAIYAATM QDTAAGGAAPETWMRNAQAYASFLARKGDKAKAISVLDQAEAFSPGKLEIVALRDRISKGDKIAPFVSGPSDGASEILLD LATALNRGGGEPFVRLYLQYALALRPDSDAALVQLAAVAEQLKDGEGAIALYRRIPDSSPLKELSDLQLGLNLADLDRHD EAITHLKAFVDAHPNDMRAYLALGGVYSSKEDFRSAASLYDKAVEALKTPTAANWNIFYQRGIAYERLKEWPKAEPNFRK ALELQPDQPQVLNYLGYSWVDMNTNLKEGLAMIQKAVDLRPSDGYIVDSLGWAYFRLGRFDDAVREMERAVSLKPEDPVL NDHLGDAYWRVGRKLEATFQWNQARDLKPDPDVLATLQQKLMKGLPPIESNTAQETPKVKPEPVPVPKG >Mature_629_residues MNFRRIEARPQKGHALPGKIESTSIPLTRRWRLAERDTMEQGRARWLTRLAIVTGMAISALPAYAKQSTEPVKISSFSGA YLAARIAEGDNDLDSAIAYYKQALAFDPSDTGLQQSLMLSLIAQGRFDESLVYADKLKEVPDVERFSRLALAVDSFHKKD FTKAQYWLKLSLESDLDRLISGVMSGWAEQGAGQAGDAMASIDKLQGPDWFGLFKSFHRALIADASNMPEKAEAIYAATM QDTAAGGAAPETWMRNAQAYASFLARKGDKAKAISVLDQAEAFSPGKLEIVALRDRISKGDKIAPFVSGPSDGASEILLD LATALNRGGGEPFVRLYLQYALALRPDSDAALVQLAAVAEQLKDGEGAIALYRRIPDSSPLKELSDLQLGLNLADLDRHD EAITHLKAFVDAHPNDMRAYLALGGVYSSKEDFRSAASLYDKAVEALKTPTAANWNIFYQRGIAYERLKEWPKAEPNFRK ALELQPDQPQVLNYLGYSWVDMNTNLKEGLAMIQKAVDLRPSDGYIVDSLGWAYFRLGRFDDAVREMERAVSLKPEDPVL NDHLGDAYWRVGRKLEATFQWNQARDLKPDPDVLATLQQKLMKGLPPIESNTAQETPKVKPEPVPVPKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319387, Length=246, Percent_Identity=25.609756097561, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI161076610, Length=282, Percent_Identity=24.113475177305, Blast_Score=66, Evalue=8e-11, Organism=Drosophila melanogaster, GI19920486, Length=282, Percent_Identity=24.113475177305, Blast_Score=66, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR013105 - InterPro: IPR019734 [H]
Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 69539; Mature: 69539
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFRRIEARPQKGHALPGKIESTSIPLTRRWRLAERDTMEQGRARWLTRLAIVTGMAISA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPAYAKQSTEPVKISSFSGAYLAARIAEGDNDLDSAIAYYKQALAFDPSDTGLQQSLMLS HHHHHHCCCCCEEEECCCCCHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH LIAQGRFDESLVYADKLKEVPDVERFSRLALAVDSFHKKDFTKAQYWLKLSLESDLDRLI HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHH SGVMSGWAEQGAGQAGDAMASIDKLQGPDWFGLFKSFHRALIADASNMPEKAEAIYAATM HHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH QDTAAGGAAPETWMRNAQAYASFLARKGDKAKAISVLDQAEAFSPGKLEIVALRDRISKG HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCC DKIAPFVSGPSDGASEILLDLATALNRGGGEPFVRLYLQYALALRPDSDAALVQLAAVAE CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH QLKDGEGAIALYRRIPDSSPLKELSDLQLGLNLADLDRHDEAITHLKAFVDAHPNDMRAY HHCCCCCCEEHHHHCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCHHHHH LALGGVYSSKEDFRSAASLYDKAVEALKTPTAANWNIFYQRGIAYERLKEWPKAEPNFRK HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCCCCCCHHH ALELQPDQPQVLNYLGYSWVDMNTNLKEGLAMIQKAVDLRPSDGYIVDSLGWAYFRLGRF HHCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH DDAVREMERAVSLKPEDPVLNDHLGDAYWRVGRKLEATFQWNQARDLKPDPDVLATLQQK HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHH LMKGLPPIESNTAQETPKVKPEPVPVPKG HHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNFRRIEARPQKGHALPGKIESTSIPLTRRWRLAERDTMEQGRARWLTRLAIVTGMAISA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPAYAKQSTEPVKISSFSGAYLAARIAEGDNDLDSAIAYYKQALAFDPSDTGLQQSLMLS HHHHHHCCCCCEEEECCCCCHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH LIAQGRFDESLVYADKLKEVPDVERFSRLALAVDSFHKKDFTKAQYWLKLSLESDLDRLI HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHH SGVMSGWAEQGAGQAGDAMASIDKLQGPDWFGLFKSFHRALIADASNMPEKAEAIYAATM HHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH QDTAAGGAAPETWMRNAQAYASFLARKGDKAKAISVLDQAEAFSPGKLEIVALRDRISKG HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCC DKIAPFVSGPSDGASEILLDLATALNRGGGEPFVRLYLQYALALRPDSDAALVQLAAVAE CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH QLKDGEGAIALYRRIPDSSPLKELSDLQLGLNLADLDRHDEAITHLKAFVDAHPNDMRAY HHCCCCCCEEHHHHCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCHHHHH LALGGVYSSKEDFRSAASLYDKAVEALKTPTAANWNIFYQRGIAYERLKEWPKAEPNFRK HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCCCCCCHHH ALELQPDQPQVLNYLGYSWVDMNTNLKEGLAMIQKAVDLRPSDGYIVDSLGWAYFRLGRF HHCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH DDAVREMERAVSLKPEDPVLNDHLGDAYWRVGRKLEATFQWNQARDLKPDPDVLATLQQK HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHH LMKGLPPIESNTAQETPKVKPEPVPVPKG HHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883699; 10984043 [H]