| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is gsiC [H]
Identifier: 13476119
GI number: 13476119
Start: 6080422
End: 6081351
Strand: Reverse
Name: gsiC [H]
Synonym: mll7348
Alternate gene names: 13476119
Gene position: 6081351-6080422 (Counterclockwise)
Preceding gene: 13476120
Following gene: 13476118
Centisome position: 86.43
GC content: 63.12
Gene sequence:
>930_bases GTGTCGCTGTCGCTGGTTACATTGTTCCTGCTCAGCATCATGGTGTTCCTGGGCGGCCAGGTGCTGCCCGGCAATGTCGG GCGCGCGATCCTGGGGCCGTTTGCCGACCAGCGCGCGGTCGACGCGCTCAATCATACGCTGGGCGTCGATCGCCCGCTGC TCACCCAATATGCGACCTGGATCTGGAATTTCATCCGCGGCGACATGGGCACGTCCTACATCTTCCGCTCGCCAGTGGCG CCGTTCGTCATCGACGCCTTGGGCAATTCGATGAAGCTGGCCGCGGTCGCCTTCGTGCTGGTGGTGCCGATCGGCATCCT CGGCGGGGTCATCGCGGCGCTCAATCTCAACCGGCCGCTCGACCGCATCATCAGCCTTGGCGGCCTGTCGGTGACGGTGC TGCCGGAGTTCGTCACCGGCATCATCCTGATCCTGATCTTCGGTGTGTGGCTGCGCTGGCTGCCGATCTCGGCGGCATGG CCCAAGAACGCCGGCTTCTTTACCCAGCTGTATTATTTGATCCTGCCGTCGGTGCCGCTGTTCCTGGTGCTGTTCGGCTA TATCGCCCGCATGGCGCGTTCCGGCATGATCGAGGCGCTCGATTCCGACTATACAAGAACGGCGGTACTCAAGGGCCTGC CCTGGCGCACGGTGATCTGGCGCCATGTGCTGCGCAATGCGCTGCTGCCGACCATCACCGTCATCGCCACCCAGACCGGC TATCTCATCGGCGGCCTGGTGGTGATCGAGACGCTGTTCCGCTACCAGGGTATCGGTTCGCTGATCTTCACCGCCGCGCG CGGCAAGGATTTCCCGATGCTGGAATCGGGCATCCTCACCATCGGCATCGTCTATGCCGTGGCGACATTGATCGCCGACT TCCTCTATTCCGTGCTCAATCCGCGCATCCGGCTGGGGTCAGACCAATGA
Upstream 100 bases:
>100_bases CCTAAAACGAAAGGGAAAGCCAATCCTCTAACAGCCAGCTCCCGCGTGGGGGCTGGCTCCACAAGGAGTCTTAGCCATTC TCTCCTTCTTTGCACGGCGT
Downstream 100 bases:
>100_bases GCGCCGTCCAGACCACCTCTCCCCCGCAAGACGACACGCGCCGGCGCAGCCCCATGGCGGAAGTCTCTTCCTCGCTCATG CGTTCGCGAACCTTCCTTGT
Product: ABC transporter binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSLSLVTLFLLSIMVFLGGQVLPGNVGRAILGPFADQRAVDALNHTLGVDRPLLTQYATWIWNFIRGDMGTSYIFRSPVA PFVIDALGNSMKLAAVAFVLVVPIGILGGVIAALNLNRPLDRIISLGGLSVTVLPEFVTGIILILIFGVWLRWLPISAAW PKNAGFFTQLYYLILPSVPLFLVLFGYIARMARSGMIEALDSDYTRTAVLKGLPWRTVIWRHVLRNALLPTITVIATQTG YLIGGLVVIETLFRYQGIGSLIFTAARGKDFPMLESGILTIGIVYAVATLIADFLYSVLNPRIRLGSDQ
Sequences:
>Translated_309_residues MSLSLVTLFLLSIMVFLGGQVLPGNVGRAILGPFADQRAVDALNHTLGVDRPLLTQYATWIWNFIRGDMGTSYIFRSPVA PFVIDALGNSMKLAAVAFVLVVPIGILGGVIAALNLNRPLDRIISLGGLSVTVLPEFVTGIILILIFGVWLRWLPISAAW PKNAGFFTQLYYLILPSVPLFLVLFGYIARMARSGMIEALDSDYTRTAVLKGLPWRTVIWRHVLRNALLPTITVIATQTG YLIGGLVVIETLFRYQGIGSLIFTAARGKDFPMLESGILTIGIVYAVATLIADFLYSVLNPRIRLGSDQ >Mature_308_residues SLSLVTLFLLSIMVFLGGQVLPGNVGRAILGPFADQRAVDALNHTLGVDRPLLTQYATWIWNFIRGDMGTSYIFRSPVAP FVIDALGNSMKLAAVAFVLVVPIGILGGVIAALNLNRPLDRIISLGGLSVTVLPEFVTGIILILIFGVWLRWLPISAAWP KNAGFFTQLYYLILPSVPLFLVLFGYIARMARSGMIEALDSDYTRTAVLKGLPWRTVIWRHVLRNALLPTITVIATQTGY LIGGLVVIETLFRYQGIGSLIFTAARGKDFPMLESGILTIGIVYAVATLIADFLYSVLNPRIRLGSDQ
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787053, Length=298, Percent_Identity=34.8993288590604, Blast_Score=184, Evalue=7e-48, Organism=Escherichia coli, GI1787497, Length=307, Percent_Identity=34.8534201954397, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI1789965, Length=299, Percent_Identity=31.7725752508361, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI1789888, Length=261, Percent_Identity=33.3333333333333, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1787761, Length=320, Percent_Identity=30.625, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1787550, Length=272, Percent_Identity=25.7352941176471, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788504, Length=282, Percent_Identity=23.4042553191489, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33765; Mature: 33634
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSLVTLFLLSIMVFLGGQVLPGNVGRAILGPFADQRAVDALNHTLGVDRPLLTQYATW CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH IWNFIRGDMGTSYIFRSPVAPFVIDALGNSMKLAAVAFVLVVPIGILGGVIAALNLNRPL HHHHHHHCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DRIISLGGLSVTVLPEFVTGIILILIFGVWLRWLPISAAWPKNAGFFTQLYYLILPSVPL HHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHH FLVLFGYIARMARSGMIEALDSDYTRTAVLKGLPWRTVIWRHVLRNALLPTITVIATQTG HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCH YLIGGLVVIETLFRYQGIGSLIFTAARGKDFPMLESGILTIGIVYAVATLIADFLYSVLN HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC PRIRLGSDQ CCCCCCCCC >Mature Secondary Structure SLSLVTLFLLSIMVFLGGQVLPGNVGRAILGPFADQRAVDALNHTLGVDRPLLTQYATW CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH IWNFIRGDMGTSYIFRSPVAPFVIDALGNSMKLAAVAFVLVVPIGILGGVIAALNLNRPL HHHHHHHCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DRIISLGGLSVTVLPEFVTGIILILIFGVWLRWLPISAAWPKNAGFFTQLYYLILPSVPL HHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHH FLVLFGYIARMARSGMIEALDSDYTRTAVLKGLPWRTVIWRHVLRNALLPTITVIATQTG HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCH YLIGGLVVIETLFRYQGIGSLIFTAARGKDFPMLESGILTIGIVYAVATLIADFLYSVLN HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC PRIRLGSDQ CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]