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The map label for this gene is dppC [H]

Identifier: 13476118

GI number: 13476118

Start: 6079547

End: 6080425

Strand: Reverse

Name: dppC [H]

Synonym: mll7349

Alternate gene names: 13476118

Gene position: 6080425-6079547 (Counterclockwise)

Preceding gene: 13476119

Following gene: 13476117

Centisome position: 86.42

GC content: 65.64

Gene sequence:

>879_bases
ATGAGCGCCGTCCAGACCACCTCTCCCCCGCAAGACGACACGCGCCGGCGCAGCCCCATGGCGGAAGTCTCTTCCTCGCT
CATGCGTTCGCGAACCTTCCTTGTCGGTCTTGCCATCGTGCTGTTCTGGGTCGCCTGCGCGCTGTTCGGCGAGCACTTCG
CGCCCTATGACCCGCTTGCCGACGACATCATCAACGCGCTGGCGCCGCCGTCGTCCGAACACTGGTTCGGCACCGACCAG
ATCGGCCGCGACGTCTTCTCGCGCGTCATCGTCGGCTCGCGCGACATCCTCACCGTCGCCCCGCTGGCGACCTTGCTGGC
GACAATTGCCGGCACGGCACTCGGCCTGCTCACCGGCTATTTCCGCGGCATCGTCGACGATGTCGTCAGCCGCATTCTCG
AAGCCTTCATGGCGATCCCCGTGGTCATCGTCGCGCTGCTCGCCATCGTCGCGCTCGGTACGTCCAAGGCCACCGTCATC
GTCGTCATCGGCTTGAGCTTCGCGCCGATCATTGCGCGCACCGTGCGCTCGGCGGTGCTGGCCGAGCGCGAACTCGATTA
TGTCGCCGCCGCGCAGCTGAGGCATGAGAGCGCCTTCCACACGATGTTCGTCGAGATCCTGCCCAATGTCATCCCGCCGA
TCCTGGTCGAGACCACCGTGCGGCTTGGCTACGCCATCTTCGCGGTCGCCACGCTCTCCTTCATGGGTTTTGGCATCCAG
CCGCCCTCGCCCGACTGGGGGCTGTCGATCTCCTCGAATTACGGCATGATCGGCGGCGGCTTCTGGTGGACGGTGCTGTT
CGACGCGCTCGCCATCGCCTCGCTGGTGATCGGTGTCAACCTTGTGGCCGACGGCGTGCATGGAGCGCTCAATGACTAG

Upstream 100 bases:

>100_bases
CGGGCATCCTCACCATCGGCATCGTCTATGCCGTGGCGACATTGATCGCCGACTTCCTCTATTCCGTGCTCAATCCGCGC
ATCCGGCTGGGGTCAGACCA

Downstream 100 bases:

>100_bases
TTCCGCAAAGGCTGAAAACGCCCTCGAACTGCACGATCTGTCGGTCGCCTACCGGGTGGCCGGGCGCAACCGCGCCGTGC
TGCGCAATCTCAGCCTCAAC

Product: ABC transporter binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSAVQTTSPPQDDTRRRSPMAEVSSSLMRSRTFLVGLAIVLFWVACALFGEHFAPYDPLADDIINALAPPSSEHWFGTDQ
IGRDVFSRVIVGSRDILTVAPLATLLATIAGTALGLLTGYFRGIVDDVVSRILEAFMAIPVVIVALLAIVALGTSKATVI
VVIGLSFAPIIARTVRSAVLAERELDYVAAAQLRHESAFHTMFVEILPNVIPPILVETTVRLGYAIFAVATLSFMGFGIQ
PPSPDWGLSISSNYGMIGGGFWWTVLFDALAIASLVIGVNLVADGVHGALND

Sequences:

>Translated_292_residues
MSAVQTTSPPQDDTRRRSPMAEVSSSLMRSRTFLVGLAIVLFWVACALFGEHFAPYDPLADDIINALAPPSSEHWFGTDQ
IGRDVFSRVIVGSRDILTVAPLATLLATIAGTALGLLTGYFRGIVDDVVSRILEAFMAIPVVIVALLAIVALGTSKATVI
VVIGLSFAPIIARTVRSAVLAERELDYVAAAQLRHESAFHTMFVEILPNVIPPILVETTVRLGYAIFAVATLSFMGFGIQ
PPSPDWGLSISSNYGMIGGGFWWTVLFDALAIASLVIGVNLVADGVHGALND
>Mature_291_residues
SAVQTTSPPQDDTRRRSPMAEVSSSLMRSRTFLVGLAIVLFWVACALFGEHFAPYDPLADDIINALAPPSSEHWFGTDQI
GRDVFSRVIVGSRDILTVAPLATLLATIAGTALGLLTGYFRGIVDDVVSRILEAFMAIPVVIVALLAIVALGTSKATVIV
VIGLSFAPIIARTVRSAVLAERELDYVAAAQLRHESAFHTMFVEILPNVIPPILVETTVRLGYAIFAVATLSFMGFGIQP
PSPDWGLSISSNYGMIGGGFWWTVLFDALAIASLVIGVNLVADGVHGALND

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=284, Percent_Identity=33.4507042253521, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1787054, Length=292, Percent_Identity=32.8767123287671, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1789964, Length=281, Percent_Identity=35.9430604982206, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1787549, Length=250, Percent_Identity=33.6, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1789889, Length=245, Percent_Identity=32.6530612244898, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787498, Length=284, Percent_Identity=30.9859154929577, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788505, Length=181, Percent_Identity=29.2817679558011, Blast_Score=81, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31124; Mature: 30992

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVQTTSPPQDDTRRRSPMAEVSSSLMRSRTFLVGLAIVLFWVACALFGEHFAPYDPLA
CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DDIINALAPPSSEHWFGTDQIGRDVFSRVIVGSRDILTVAPLATLLATIAGTALGLLTGY
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FRGIVDDVVSRILEAFMAIPVVIVALLAIVALGTSKATVIVVIGLSFAPIIARTVRSAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH
AERELDYVAAAQLRHESAFHTMFVEILPNVIPPILVETTVRLGYAIFAVATLSFMGFGIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PPSPDWGLSISSNYGMIGGGFWWTVLFDALAIASLVIGVNLVADGVHGALND
CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SAVQTTSPPQDDTRRRSPMAEVSSSLMRSRTFLVGLAIVLFWVACALFGEHFAPYDPLA
CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DDIINALAPPSSEHWFGTDQIGRDVFSRVIVGSRDILTVAPLATLLATIAGTALGLLTGY
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FRGIVDDVVSRILEAFMAIPVVIVALLAIVALGTSKATVIVVIGLSFAPIIARTVRSAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH
AERELDYVAAAQLRHESAFHTMFVEILPNVIPPILVETTVRLGYAIFAVATLSFMGFGIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PPSPDWGLSISSNYGMIGGGFWWTVLFDALAIASLVIGVNLVADGVHGALND
CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]