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The map label for this gene is ocd1 [H]

Identifier: 13475945

GI number: 13475945

Start: 5894176

End: 5895168

Strand: Direct

Name: ocd1 [H]

Synonym: mlr7139

Alternate gene names: 13475945

Gene position: 5894176-5895168 (Clockwise)

Preceding gene: 13475944

Following gene: 13475946

Centisome position: 83.77

GC content: 65.66

Gene sequence:

>993_bases
ATGAGCCGTATGACGATTCTGACCGAAGCAGAACTGCGCAAGATCGTAACGCTCGATCTCGACGCCGTCGCCTGCGTCGA
GAACGCTTTTCGCGCGCTCGCCACTCTGCCCGTGGCGATGCCGCCGATCCTGCGGCTCGACATTCCCGAGCATCGCGGCG
AGGTCGACGTGAAGTCCGCTTATGTGCCCGGTATCGATGGCTTCGCCGTGAAGATCAGCTCCGGCTTCTTCGACAATCCA
AAGCTCGGCCTGCCGAGCGGTGGCGGCATGATGGTGCTGCTTTCGGCAAGGACCGGTGTGGTAGAGGCGCTGCTGCTCGA
CAATGGCTACCTCACCGATGTCCGCACCGCTGCGGCTGGTGCGGTTGCGGCGAAGCATCTGTCGCGCGAAGACGCCACCG
TGGCAGCAATCTTCGGCGCCGGTTTGCAGGCAGGTCTGCAACTGGAAGCGCTGCGCCTTGTCAGGCCGATCGCCGAAGCC
CGCATCTGGGCGCGCGACGCCGCCAAGGCTGAAGCCACCGCTGCCCGCTTGCGCGAAAGACTGGGCATTACCGTGCACGC
CGAGCCCGATGCAGCGGAGGCGGTTGCCGGCGCCGATATCATCGTCACCACCACACCGTCGACCGAGCCGCTGATCAAGG
CAGGCTTCATTTCGGCCGGCCAGCACATCACCGCCATGGGCTCGGACGCCGAACACAAGAACGAGATCGCGCCGGCCATC
CTGCGCATGGCCGATCTCTATGTCGCCGACAGTGCGCGCCAGACGCGGCGTCTGGGCGAACTGCATCATGCCATCGCGGC
AGGGGTGATGGCCGCCGATGAAGACGTGACCGAACTCGGCCAGATCATCGCCGGCACCAAACATGGCCGGCGCGCGGCCA
GCGATATCACCATCGCCGACCTGACCGGCACCGGCGTGCAGGACACGGCGATCGCCACGCTCGCCCGCAACCGCGCGCGG
GCGGCCAATGCCGGAACCATTTTTGAAAGCTGA

Upstream 100 bases:

>100_bases
AGGCGAAAGGGCCGATGGTCGTACTTCTCTCCGGCCGCAACATCGACATGAATGCGCACCGCCGGATCATCTGCGGCGAG
GCAATCGGGGAGCGCGCCGC

Downstream 100 bases:

>100_bases
TGCTGGCCGCAAAGCATGATCCGGAAAAGTGGGAACCGGTTTTCCGATCAGATCATGCTCAAGCAAAATTCCTGGAGCCG
GGTTCACCGAAGTTGAAACG

Product: ectoine utilization protein EutC

Products: NA

Alternate protein names: OCD 1 [H]

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSRMTILTEAELRKIVTLDLDAVACVENAFRALATLPVAMPPILRLDIPEHRGEVDVKSAYVPGIDGFAVKISSGFFDNP
KLGLPSGGGMMVLLSARTGVVEALLLDNGYLTDVRTAAAGAVAAKHLSREDATVAAIFGAGLQAGLQLEALRLVRPIAEA
RIWARDAAKAEATAARLRERLGITVHAEPDAAEAVAGADIIVTTTPSTEPLIKAGFISAGQHITAMGSDAEHKNEIAPAI
LRMADLYVADSARQTRRLGELHHAIAAGVMAADEDVTELGQIIAGTKHGRRAASDITIADLTGTGVQDTAIATLARNRAR
AANAGTIFES

Sequences:

>Translated_330_residues
MSRMTILTEAELRKIVTLDLDAVACVENAFRALATLPVAMPPILRLDIPEHRGEVDVKSAYVPGIDGFAVKISSGFFDNP
KLGLPSGGGMMVLLSARTGVVEALLLDNGYLTDVRTAAAGAVAAKHLSREDATVAAIFGAGLQAGLQLEALRLVRPIAEA
RIWARDAAKAEATAARLRERLGITVHAEPDAAEAVAGADIIVTTTPSTEPLIKAGFISAGQHITAMGSDAEHKNEIAPAI
LRMADLYVADSARQTRRLGELHHAIAAGVMAADEDVTELGQIIAGTKHGRRAASDITIADLTGTGVQDTAIATLARNRAR
AANAGTIFES
>Mature_329_residues
SRMTILTEAELRKIVTLDLDAVACVENAFRALATLPVAMPPILRLDIPEHRGEVDVKSAYVPGIDGFAVKISSGFFDNPK
LGLPSGGGMMVLLSARTGVVEALLLDNGYLTDVRTAAAGAVAAKHLSREDATVAAIFGAGLQAGLQLEALRLVRPIAEAR
IWARDAAKAEATAARLRERLGITVHAEPDAAEAVAGADIIVTTTPSTEPLIKAGFISAGQHITAMGSDAEHKNEIAPAIL
RMADLYVADSARQTRRLGELHHAIAAGVMAADEDVTELGQIIAGTKHGRRAASDITIADLTGTGVQDTAIATLARNRARA
ANAGTIFES

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=279, Percent_Identity=29.3906810035842, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI62241008, Length=279, Percent_Identity=29.3906810035842, Blast_Score=101, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24642678, Length=289, Percent_Identity=29.0657439446367, Blast_Score=86, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014334
- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 34474; Mature: 34343

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRMTILTEAELRKIVTLDLDAVACVENAFRALATLPVAMPPILRLDIPEHRGEVDVKSA
CCCEEEEEHHHHHEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEE
YVPGIDGFAVKISSGFFDNPKLGLPSGGGMMVLLSARTGVVEALLLDNGYLTDVRTAAAG
ECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHH
AVAAKHLSREDATVAAIFGAGLQAGLQLEALRLVRPIAEARIWARDAAKAEATAARLRER
HHHHHHHCCCCCEEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGITVHAEPDAAEAVAGADIIVTTTPSTEPLIKAGFISAGQHITAMGSDAEHKNEIAPAI
CCEEEECCCCHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
LRMADLYVADSARQTRRLGELHHAIAAGVMAADEDVTELGQIIAGTKHGRRAASDITIAD
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHCCCEEEE
LTGTGVQDTAIATLARNRARAANAGTIFES
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SRMTILTEAELRKIVTLDLDAVACVENAFRALATLPVAMPPILRLDIPEHRGEVDVKSA
CCEEEEEHHHHHEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEE
YVPGIDGFAVKISSGFFDNPKLGLPSGGGMMVLLSARTGVVEALLLDNGYLTDVRTAAAG
ECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHH
AVAAKHLSREDATVAAIFGAGLQAGLQLEALRLVRPIAEARIWARDAAKAEATAARLRER
HHHHHHHCCCCCEEEEEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGITVHAEPDAAEAVAGADIIVTTTPSTEPLIKAGFISAGQHITAMGSDAEHKNEIAPAI
CCEEEECCCCHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
LRMADLYVADSARQTRRLGELHHAIAAGVMAADEDVTELGQIIAGTKHGRRAASDITIAD
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHCCCEEEE
LTGTGVQDTAIATLARNRARAANAGTIFES
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]