| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475734
Identifier: 13475734
GI number: 13475734
Start: 5661466
End: 5662500
Strand: Reverse
Name: 13475734
Synonym: mll6881
Alternate gene names: NA
Gene position: 5662500-5661466 (Counterclockwise)
Preceding gene: 13475735
Following gene: 13475733
Centisome position: 80.48
GC content: 68.02
Gene sequence:
>1035_bases ATGAAACCGCCCCGCATTCACCCGGTGCACGGGCTGCGGACGAATGCGCGCGACCTGGTGATGATCAGCGTCGCAGGACA AGTGGCATCGCCGACGGAGAGGGGCACTCCATGGCGCATCGGTTACGATGGCAGGCCGCGCTCTCTGCCAGGCACCGGCG GCATCGTGCTCAACCACCGCGTCGGCGACCCCTGTGTCGGGCTGGCCGGGGACCATGTCGAACCGGCGGTGTCGATCCGC AATGAAGCGCGCGCCGCCGGCGGCAACCCCGACGCCGCCAACCAGGCGCTGCAGAGCTATTCCTGCGTCGGCAACCACGC CATCGTCACGTCAGGACGCGCGGCCGGCGCACGCGGCGTGGTGACCGGCAAGCATGGCGGCGTCGACACCGTGCTGATCG ACTTTCCGCTGCCGGCGATGCGGCAGATGGCGATCGGCGACCGCATCCAGGTCTGGGCCTACGGGCTTGGCCTGCGCCTG ACCGACTATCCTGACGTCGCGATCTGGAACTGTTCGCCAAGGCTGCTGGCGCGCTGGCGCCCGGTCGAGCGCAACGGCAG GATCCACGTCAAGGTGACGCACCGCATCCCTGCCCGCGTCATGGGCTCGGGTCTCGGCCGCAATAATGTGCTGCGCGGCG ACTACGACATCCAGATGTCCGATCCTGGCATGGTGCGGCGCTACAAGCTTGGATCGCTGCGCTTCGGCGACATTGTCGGC ATCATGGATGCCGACAACCGTTATGGCCGGTCGCGGTTGGGAGGACATGTGTCGGTTGGCGTCATCGTGCACAGCGACTC CACTGTCGCGGGTCACGGCCCGGGCGTTGTCTCGCTGCTTTCAGCGCCGGCCTCCATTCTCCAGCTGGAGCTCAGCCCGG ACGCCAACATCGCGCGCTACCTGGACATTCGCCCACCCCGACCGGCACGGCCGTCCTTTCCCTTGCCGACCGTCGAGCAA AGGGAACGAACCGTGGCAAGGCTGCGCCGGCGGGCGACGGCATCGGACGCAAGCATGGTGGCCGGACCCGGCTAG
Upstream 100 bases:
>100_bases CGCTGGAAGATCCGGCCGACCACGATGACGGGACGCCGGACGATCCCTGGCGCAATGCCTGCGCGCTCTGGTACGATGTG GTCCCGGCGGAGGCCGCGGC
Downstream 100 bases:
>100_bases ATCCGAGCCCGAGCGGAGAAACGAGTTACGAGAAAGGGATCGGCATGTCATATCTCGACGAACAACTCGACGCGCTGGTC AACGCGGCCGCGCAAACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MKPPRIHPVHGLRTNARDLVMISVAGQVASPTERGTPWRIGYDGRPRSLPGTGGIVLNHRVGDPCVGLAGDHVEPAVSIR NEARAAGGNPDAANQALQSYSCVGNHAIVTSGRAAGARGVVTGKHGGVDTVLIDFPLPAMRQMAIGDRIQVWAYGLGLRL TDYPDVAIWNCSPRLLARWRPVERNGRIHVKVTHRIPARVMGSGLGRNNVLRGDYDIQMSDPGMVRRYKLGSLRFGDIVG IMDADNRYGRSRLGGHVSVGVIVHSDSTVAGHGPGVVSLLSAPASILQLELSPDANIARYLDIRPPRPARPSFPLPTVEQ RERTVARLRRRATASDASMVAGPG
Sequences:
>Translated_344_residues MKPPRIHPVHGLRTNARDLVMISVAGQVASPTERGTPWRIGYDGRPRSLPGTGGIVLNHRVGDPCVGLAGDHVEPAVSIR NEARAAGGNPDAANQALQSYSCVGNHAIVTSGRAAGARGVVTGKHGGVDTVLIDFPLPAMRQMAIGDRIQVWAYGLGLRL TDYPDVAIWNCSPRLLARWRPVERNGRIHVKVTHRIPARVMGSGLGRNNVLRGDYDIQMSDPGMVRRYKLGSLRFGDIVG IMDADNRYGRSRLGGHVSVGVIVHSDSTVAGHGPGVVSLLSAPASILQLELSPDANIARYLDIRPPRPARPSFPLPTVEQ RERTVARLRRRATASDASMVAGPG >Mature_344_residues MKPPRIHPVHGLRTNARDLVMISVAGQVASPTERGTPWRIGYDGRPRSLPGTGGIVLNHRVGDPCVGLAGDHVEPAVSIR NEARAAGGNPDAANQALQSYSCVGNHAIVTSGRAAGARGVVTGKHGGVDTVLIDFPLPAMRQMAIGDRIQVWAYGLGLRL TDYPDVAIWNCSPRLLARWRPVERNGRIHVKVTHRIPARVMGSGLGRNNVLRGDYDIQMSDPGMVRRYKLGSLRFGDIVG IMDADNRYGRSRLGGHVSVGVIVHSDSTVAGHGPGVVSLLSAPASILQLELSPDANIARYLDIRPPRPARPSFPLPTVEQ RERTVARLRRRATASDASMVAGPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36869; Mature: 36869
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPPRIHPVHGLRTNARDLVMISVAGQVASPTERGTPWRIGYDGRPRSLPGTGGIVLNHR CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECC VGDPCVGLAGDHVEPAVSIRNEARAAGGNPDAANQALQSYSCVGNHAIVTSGRAAGARGV CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCE VTGKHGGVDTVLIDFPLPAMRQMAIGDRIQVWAYGLGLRLTDYPDVAIWNCSPRLLARWR EECCCCCEEEEEEECCCHHHHHHHCCCEEEEEEEECCEEEECCCCEEEEECCHHHHHCCC PVERNGRIHVKVTHRIPARVMGSGLGRNNVLRGDYDIQMSDPGMVRRYKLGSLRFGDIVG CCCCCCEEEEEEECCCCHHHHHCCCCCCCEECCCEEEEECCCCCEEEEEECCEEECCEEE IMDADNRYGRSRLGGHVSVGVIVHSDSTVAGHGPGVVSLLSAPASILQLELSPDANIARY EEECCCCCCHHHCCCEEEEEEEEECCCEECCCCCCHHHHHHCCCEEEEEEECCCCCEEEE LDIRPPRPARPSFPLPTVEQRERTVARLRRRATASDASMVAGPG EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCC >Mature Secondary Structure MKPPRIHPVHGLRTNARDLVMISVAGQVASPTERGTPWRIGYDGRPRSLPGTGGIVLNHR CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEECC VGDPCVGLAGDHVEPAVSIRNEARAAGGNPDAANQALQSYSCVGNHAIVTSGRAAGARGV CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCE VTGKHGGVDTVLIDFPLPAMRQMAIGDRIQVWAYGLGLRLTDYPDVAIWNCSPRLLARWR EECCCCCEEEEEEECCCHHHHHHHCCCEEEEEEEECCEEEECCCCEEEEECCHHHHHCCC PVERNGRIHVKVTHRIPARVMGSGLGRNNVLRGDYDIQMSDPGMVRRYKLGSLRFGDIVG CCCCCCEEEEEEECCCCHHHHHCCCCCCCEECCCEEEEECCCCCEEEEEECCEEECCEEE IMDADNRYGRSRLGGHVSVGVIVHSDSTVAGHGPGVVSLLSAPASILQLELSPDANIARY EEECCCCCCHHHCCCEEEEEEEEECCCEECCCCCCHHHHHHCCCEEEEEEECCCCCEEEE LDIRPPRPARPSFPLPTVEQRERTVARLRRRATASDASMVAGPG EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA