| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475733
Identifier: 13475733
GI number: 13475733
Start: 5660720
End: 5661421
Strand: Reverse
Name: 13475733
Synonym: mll6880
Alternate gene names: NA
Gene position: 5661421-5660720 (Counterclockwise)
Preceding gene: 13475734
Following gene: 13475732
Centisome position: 80.46
GC content: 67.81
Gene sequence:
>702_bases ATGTCATATCTCGACGAACAACTCGACGCGCTGGTCAACGCGGCCGCGCAAACAGTCGCTCACCGTCCGCCATGCGGCTG CGCGCGCTGTCGCCGGCAGCAAGGCTTTCGCGCCGTCGAGGTCAGGCGCCGGCATTTTCCGAGTTGCGGCTGCGGCAGTT GCGGAGACCTCGCTTCCTTCGATGAGACGGCCATACGGCGCGGGCGTACCCCAAGGCCGGCGCGTGGCCAGACCTCGGTG CGGGCGCGCGGGTCACAACTGCCGGGCTGGCGCGGCTGGACGCCGCCGGTCTCGCTGGCGGCAATCGACGCGGCACGCAC TGCCGCGAGCCGCGGCGGACACGTCGACGCTTTGCTGCGGCCGTTCCTGGCGCCGGGACCGCAGGTCTATCGCATCACCC GCGCCGGCATCGACCGCGACCGGCCGCTCAGCATCGGCATGACCAAAGGCAACAATTCGATCGCCCAGAGAATTATCGAA CACTACCGGCAACCGAGCCGGGCCGACCCCAGGGTAAACACCGCAATCCGCAATCTGCAGCCGGGCCAGATCCTGGTCCA GGCAGCCCGGCTCACCCGCCAGGCGATGCATCCAAGGCGGGCCAGGAACTACGAAGGCTGGCTGCAGGACCGGGAGCGCC CGCTGCTGTACGACCCCAACAGCACCACATTCGATGAAATGCCGCTGATGCGCAACAATTGA
Upstream 100 bases:
>100_bases GGCTGCGCCGGCGGGCGACGGCATCGGACGCAAGCATGGTGGCCGGACCCGGCTAGATCCGAGCCCGAGCGGAGAAACGA GTTACGAGAAAGGGATCGGC
Downstream 100 bases:
>100_bases ACCAAGGGAGATTCCCATGCACGGGCAAGCCGCAACTCATGCAAGGTCGGTATGGGCCGACCTCGACGCCATCGTTCTTC AGGAGGTCAAAGCGCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSYLDEQLDALVNAAAQTVAHRPPCGCARCRRQQGFRAVEVRRRHFPSCGCGSCGDLASFDETAIRRGRTPRPARGQTSV RARGSQLPGWRGWTPPVSLAAIDAARTAASRGGHVDALLRPFLAPGPQVYRITRAGIDRDRPLSIGMTKGNNSIAQRIIE HYRQPSRADPRVNTAIRNLQPGQILVQAARLTRQAMHPRRARNYEGWLQDRERPLLYDPNSTTFDEMPLMRNN
Sequences:
>Translated_233_residues MSYLDEQLDALVNAAAQTVAHRPPCGCARCRRQQGFRAVEVRRRHFPSCGCGSCGDLASFDETAIRRGRTPRPARGQTSV RARGSQLPGWRGWTPPVSLAAIDAARTAASRGGHVDALLRPFLAPGPQVYRITRAGIDRDRPLSIGMTKGNNSIAQRIIE HYRQPSRADPRVNTAIRNLQPGQILVQAARLTRQAMHPRRARNYEGWLQDRERPLLYDPNSTTFDEMPLMRNN >Mature_232_residues SYLDEQLDALVNAAAQTVAHRPPCGCARCRRQQGFRAVEVRRRHFPSCGCGSCGDLASFDETAIRRGRTPRPARGQTSVR ARGSQLPGWRGWTPPVSLAAIDAARTAASRGGHVDALLRPFLAPGPQVYRITRAGIDRDRPLSIGMTKGNNSIAQRIIEH YRQPSRADPRVNTAIRNLQPGQILVQAARLTRQAMHPRRARNYEGWLQDRERPLLYDPNSTTFDEMPLMRNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26042; Mature: 25911
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYLDEQLDALVNAAAQTVAHRPPCGCARCRRQQGFRAVEVRRRHFPSCGCGSCGDLASF CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHH DETAIRRGRTPRPARGQTSVRARGSQLPGWRGWTPPVSLAAIDAARTAASRGGHVDALLR HHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH PFLAPGPQVYRITRAGIDRDRPLSIGMTKGNNSIAQRIIEHYRQPSRADPRVNTAIRNLQ HHHCCCCCEEEEHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCC PGQILVQAARLTRQAMHPRRARNYEGWLQDRERPLLYDPNSTTFDEMPLMRNN CHHHHHHHHHHHHHHHCHHHHCCCHHHHHCCCCCEEECCCCCCHHHCCCCCCC >Mature Secondary Structure SYLDEQLDALVNAAAQTVAHRPPCGCARCRRQQGFRAVEVRRRHFPSCGCGSCGDLASF CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHH DETAIRRGRTPRPARGQTSVRARGSQLPGWRGWTPPVSLAAIDAARTAASRGGHVDALLR HHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH PFLAPGPQVYRITRAGIDRDRPLSIGMTKGNNSIAQRIIEHYRQPSRADPRVNTAIRNLQ HHHCCCCCEEEEHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCC PGQILVQAARLTRQAMHPRRARNYEGWLQDRERPLLYDPNSTTFDEMPLMRNN CHHHHHHHHHHHHHHHCHHHHCCCHHHHHCCCCCEEECCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA