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The map label for this gene is cyoA [H]

Identifier: 13475706

GI number: 13475706

Start: 5635728

End: 5636909

Strand: Direct

Name: cyoA [H]

Synonym: mlr6846

Alternate gene names: 13475706

Gene position: 5635728-5636909 (Clockwise)

Preceding gene: 13475704

Following gene: 13475707

Centisome position: 80.1

GC content: 65.14

Gene sequence:

>1182_bases
ATGAAACGATTTGGAGCCTTGCTTCTGTTCCCCCTGGCCGGGTTGTTGAGCGGCTGCGATCTGGTCGTGCTCGCGCCCGC
CGGCGATGTCGCGGCCCAGCAGCGCGACCTGCTCGTGGTCTCGACCTTGCTGATGCTGGTCATCATCGTGCCGGTCATGG
CGCTGACGGTCTTCTTCGCTTGGCGCTATCGGCAATCCAACACCGCGGCGACCTATGCGCCGGACTGGGATCATTCGACG
AAGCTGGAGCTGGTGATCTGGGCGGCGCCCCTGCTCATCATCATCTGCCTTGGCGCGCTGACCTGGCTCGGCACGCATTT
GCTCGACCCATACCGCCGGATCGACCGCATCGAGCCCGGCCAGCCGGTCACTGAAGCGCACAAGCCGCTCCGGGTCGAGG
TCGTGGCGCTCGACTGGAAATGGCTCTTCATCTATCCCGACTATGGCATCGCCTCCGTCAACGAGCTGGCGGCGCCGGTC
AACCAGCCGATCGACTTCCGCATCACCTCGTCGGCGGTGATGAATTCCTTCTACATTCCAGCCCTGGCCGGGCAGATCTA
TGCCATGCCGGCGATGGAGACCAAGCTGCACGCCGTCATCAACCTGCCGGGCACCTATAGCGGCTTCTCGGCCAATTACA
GCGGCGCCGGTTTTTCGGGGATGCGCTTTGCCTTCCACGGCCTGTCCGACCAGGCTTTCGACCAGTGGGTGGCGCAGGCC
AGGACCGCGCCGGGGGCGCTCAGCCGAGAAAACTATCTCGAACTTGAAAAGCCGAGCGAGAACGAGCCGGTCCGCCACTT
CGCCTCCGTCGATCCCGACCTTTTTGGCGCCATCCTCAATCTGTGCGTCGAGCGCGGCAAGATGTGCATGAACGAGATGA
TGTCGATCGACGCCAAGGGCGGCCTCGGTCTTGCGGGTGTGCGCAACACGCTGCCGCTGCAATACGACAAGCTCGCCCGG
CGCGGCGCGGTGTTCGGCAATGATCCGTCCTATGTCGCCAGCATTTGCACGGCGGAGGAAGCGGCTGCCGCAGCGCGCGC
GGCCAGCGATGCCACGTCAAAGGATTGGCCGGCCAGAAATCTTTCCCCGCTGCGCGGGGCGGGGCTGCTGAGGCCCGGGA
CCGAGAGCCGTCGCGCCGCGGCGGATACGCCGTCGCTCGGCCTGCTGCGGCGCGAATTGTGA

Upstream 100 bases:

>100_bases
AAATTGTCCAATGTTGCCGCAGCGCCGCGAGCAGTAGCCCTTGGATCGATACCGCACTGCAACATGAACAGTTGCGGCGG
TCCTTCGAGGGCAGCGTTTG

Downstream 100 bases:

>100_bases
GAGACAGCCGATGCCCGATACGCTGACCAAATTCATTTTCGGCCGTCTTACCTGGGACTCGCTGCCGCTGCACGAGCCGA
TCGTGGTGGCAACCTTCGTC

Product: cytochrome o ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MKRFGALLLFPLAGLLSGCDLVVLAPAGDVAAQQRDLLVVSTLLMLVIIVPVMALTVFFAWRYRQSNTAATYAPDWDHST
KLELVIWAAPLLIIICLGALTWLGTHLLDPYRRIDRIEPGQPVTEAHKPLRVEVVALDWKWLFIYPDYGIASVNELAAPV
NQPIDFRITSSAVMNSFYIPALAGQIYAMPAMETKLHAVINLPGTYSGFSANYSGAGFSGMRFAFHGLSDQAFDQWVAQA
RTAPGALSRENYLELEKPSENEPVRHFASVDPDLFGAILNLCVERGKMCMNEMMSIDAKGGLGLAGVRNTLPLQYDKLAR
RGAVFGNDPSYVASICTAEEAAAAARAASDATSKDWPARNLSPLRGAGLLRPGTESRRAAADTPSLGLLRREL

Sequences:

>Translated_393_residues
MKRFGALLLFPLAGLLSGCDLVVLAPAGDVAAQQRDLLVVSTLLMLVIIVPVMALTVFFAWRYRQSNTAATYAPDWDHST
KLELVIWAAPLLIIICLGALTWLGTHLLDPYRRIDRIEPGQPVTEAHKPLRVEVVALDWKWLFIYPDYGIASVNELAAPV
NQPIDFRITSSAVMNSFYIPALAGQIYAMPAMETKLHAVINLPGTYSGFSANYSGAGFSGMRFAFHGLSDQAFDQWVAQA
RTAPGALSRENYLELEKPSENEPVRHFASVDPDLFGAILNLCVERGKMCMNEMMSIDAKGGLGLAGVRNTLPLQYDKLAR
RGAVFGNDPSYVASICTAEEAAAAARAASDATSKDWPARNLSPLRGAGLLRPGTESRRAAADTPSLGLLRREL
>Mature_393_residues
MKRFGALLLFPLAGLLSGCDLVVLAPAGDVAAQQRDLLVVSTLLMLVIIVPVMALTVFFAWRYRQSNTAATYAPDWDHST
KLELVIWAAPLLIIICLGALTWLGTHLLDPYRRIDRIEPGQPVTEAHKPLRVEVVALDWKWLFIYPDYGIASVNELAAPV
NQPIDFRITSSAVMNSFYIPALAGQIYAMPAMETKLHAVINLPGTYSGFSANYSGAGFSGMRFAFHGLSDQAFDQWVAQA
RTAPGALSRENYLELEKPSENEPVRHFASVDPDLFGAILNLCVERGKMCMNEMMSIDAKGGLGLAGVRNTLPLQYDKLAR
RGAVFGNDPSYVASICTAEEAAAAARAASDATSKDWPARNLSPLRGAGLLRPGTESRRAAADTPSLGLLRREL

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=288, Percent_Identity=48.2638888888889, Blast_Score=291, Evalue=5e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 42749; Mature: 42749

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFGALLLFPLAGLLSGCDLVVLAPAGDVAAQQRDLLVVSTLLMLVIIVPVMALTVFFA
CCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
WRYRQSNTAATYAPDWDHSTKLELVIWAAPLLIIICLGALTWLGTHLLDPYRRIDRIEPG
HHHCCCCCCEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCC
QPVTEAHKPLRVEVVALDWKWLFIYPDYGIASVNELAAPVNQPIDFRITSSAVMNSFYIP
CCHHHCCCCEEEEEEEEEEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHH
ALAGQIYAMPAMETKLHAVINLPGTYSGFSANYSGAGFSGMRFAFHGLSDQAFDQWVAQA
HHHCCCEECCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHH
RTAPGALSRENYLELEKPSENEPVRHFASVDPDLFGAILNLCVERGKMCMNEMMSIDAKG
CCCCCCCCCCCCEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLGLAGVRNTLPLQYDKLARRGAVFGNDPSYVASICTAEEAAAAARAASDATSKDWPARN
CCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LSPLRGAGLLRPGTESRRAAADTPSLGLLRREL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MKRFGALLLFPLAGLLSGCDLVVLAPAGDVAAQQRDLLVVSTLLMLVIIVPVMALTVFFA
CCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
WRYRQSNTAATYAPDWDHSTKLELVIWAAPLLIIICLGALTWLGTHLLDPYRRIDRIEPG
HHHCCCCCCEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCC
QPVTEAHKPLRVEVVALDWKWLFIYPDYGIASVNELAAPVNQPIDFRITSSAVMNSFYIP
CCHHHCCCCEEEEEEEEEEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHH
ALAGQIYAMPAMETKLHAVINLPGTYSGFSANYSGAGFSGMRFAFHGLSDQAFDQWVAQA
HHHCCCEECCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHH
RTAPGALSRENYLELEKPSENEPVRHFASVDPDLFGAILNLCVERGKMCMNEMMSIDAKG
CCCCCCCCCCCCEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLGLAGVRNTLPLQYDKLARRGAVFGNDPSYVASICTAEEAAAAARAASDATSKDWPARN
CCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LSPLRGAGLLRPGTESRRAAADTPSLGLLRREL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]