| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475640
Identifier: 13475640
GI number: 13475640
Start: 5559877
End: 5560554
Strand: Reverse
Name: 13475640
Synonym: mll6760
Alternate gene names: NA
Gene position: 5560554-5559877 (Counterclockwise)
Preceding gene: 13475642
Following gene: 13475639
Centisome position: 79.03
GC content: 61.95
Gene sequence:
>678_bases ATGACACTGATCGAGAGGCGCAACGATACCGTTGCGGTCAGCCAATACATTGTACTGAAGGATATTCGTCACGCACGTCC GATAAACCTGTCGGATCGACCGGACGCCAGACCTGGCGTGCCGCAGCGACGCAGTTTGGAATCCATAACCGGCATGCTTG ACCGCATCGGCTGCGGCTACCTCGTGCTGGACCGCGACAGGAAAGTAGTCGAATGGAATACTGCTGCACAGGACACGCTT GAGCGCCAGGGCGAAGCGGCCGACACGGCCGCCGAGCTGTCCTCAGGACTAAGGCGGCTGGTCGCGAATGTACCGGTCCA TTTCCAGCCGGGATCGCTCTCATGGGTGGTGATCCGCAGCAGAGGCGACAGGCCTGTGATCCTGAATGAGACGGGCGTCG TCACACCCGACGGAACGAGCATCGTCGCGTTGCTGGACCGGGAGAACACATCGGCGGCCAATCCTCAAACCTTGCAAAGG ATGTTCGGCTTGACCAGCGCGGAAACGCAGCTGGCGCTGCGCCTGGCGCAAGGCGATGCGCCCCTGGAGATCGCTCGCAG CTGGCATCTCAGCCGCACGACGATCCGCTCTCAGCTTGCCTCGCTGTTCGCCAAGACCGAAACAAGGCGGCAGGCGGAAC TGGTGGCGCTTCTGGGGCGCATTTCGGTCCTGCCATGA
Upstream 100 bases:
>100_bases AAGAAAAAGGAGTGCATGCCTCGTCGATAGGCAGAGTTCAAGGAAAGTAAACCAGCAAAATTTACTTGGGTCGGCAGCAA CTAGGGTTGGGGTAGAAGCG
Downstream 100 bases:
>100_bases AATAGCGATTTCGGCGGGCGCCAGCACCCGCCCGGATTCAAACTAAAGTATGTGCCATGGCACCGCGGCCGCACATTCTG CGGCCGCGGTTGCGCAGATT
Product: two component system response regulator
Products: NA
Alternate protein names: Two Component System Response Regulator; Regulatory Protein LuxR
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTLIERRNDTVAVSQYIVLKDIRHARPINLSDRPDARPGVPQRRSLESITGMLDRIGCGYLVLDRDRKVVEWNTAAQDTL ERQGEAADTAAELSSGLRRLVANVPVHFQPGSLSWVVIRSRGDRPVILNETGVVTPDGTSIVALLDRENTSAANPQTLQR MFGLTSAETQLALRLAQGDAPLEIARSWHLSRTTIRSQLASLFAKTETRRQAELVALLGRISVLP
Sequences:
>Translated_225_residues MTLIERRNDTVAVSQYIVLKDIRHARPINLSDRPDARPGVPQRRSLESITGMLDRIGCGYLVLDRDRKVVEWNTAAQDTL ERQGEAADTAAELSSGLRRLVANVPVHFQPGSLSWVVIRSRGDRPVILNETGVVTPDGTSIVALLDRENTSAANPQTLQR MFGLTSAETQLALRLAQGDAPLEIARSWHLSRTTIRSQLASLFAKTETRRQAELVALLGRISVLP >Mature_224_residues TLIERRNDTVAVSQYIVLKDIRHARPINLSDRPDARPGVPQRRSLESITGMLDRIGCGYLVLDRDRKVVEWNTAAQDTLE RQGEAADTAAELSSGLRRLVANVPVHFQPGSLSWVVIRSRGDRPVILNETGVVTPDGTSIVALLDRENTSAANPQTLQRM FGLTSAETQLALRLAQGDAPLEIARSWHLSRTTIRSQLASLFAKTETRRQAELVALLGRISVLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24836; Mature: 24705
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIERRNDTVAVSQYIVLKDIRHARPINLSDRPDARPGVPQRRSLESITGMLDRIGCGY CCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCE LVLDRDRKVVEWNTAAQDTLERQGEAADTAAELSSGLRRLVANVPVHFQPGSLSWVVIRS EEECCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEC RGDRPVILNETGVVTPDGTSIVALLDRENTSAANPQTLQRMFGLTSAETQLALRLAQGDA CCCCCEEECCCCEECCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHEEEECCCCC PLEIARSWHLSRTTIRSQLASLFAKTETRRQAELVALLGRISVLP CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLIERRNDTVAVSQYIVLKDIRHARPINLSDRPDARPGVPQRRSLESITGMLDRIGCGY CCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCE LVLDRDRKVVEWNTAAQDTLERQGEAADTAAELSSGLRRLVANVPVHFQPGSLSWVVIRS EEECCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEC RGDRPVILNETGVVTPDGTSIVALLDRENTSAANPQTLQRMFGLTSAETQLALRLAQGDA CCCCCEEECCCCEECCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHEEEECCCCC PLEIARSWHLSRTTIRSQLASLFAKTETRRQAELVALLGRISVLP CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA