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The map label for this gene is yqjQ [H]

Identifier: 13475580

GI number: 13475580

Start: 5482078

End: 5482908

Strand: Reverse

Name: yqjQ [H]

Synonym: mll6686

Alternate gene names: 13475580

Gene position: 5482908-5482078 (Counterclockwise)

Preceding gene: 13475581

Following gene: 13475579

Centisome position: 77.93

GC content: 62.45

Gene sequence:

>831_bases
ATGTCAGTGGGAACGGCCGTCATTACCGGCGCTTCAGGCGGCATCGGAGCGGTCTATGTCGACCGTCTCGCAGAGCGGGG
ATACGACCTCGTCCTGGTCGCCCGCAACGGAGACAAGCTAACCCAGGTCGCGAACCGCGTTCGCGCAAAAACCGGCCGCA
AGATCGACACCTTGTCCGCCGATCTGGCCAATGCGTCAGACCTCGCGCGCGTGGAGGCTTTCCTTAGGGAAACCCCAGAC
GTCACCTTGCTTGTCAACAATGCGGGCCTCGGTGGGGCGTTGAAACTGCTTGACTCCGACGTCGACCAGATGACGTCGCT
GATTTCGCTCAATGTCACGGCGCTCACCCGACTAACCTATGCCATCGTGCCGGGTTTCGTGGCGCGCGCCGCTGGGACGA
TCATCAACATCGCCTCGATCGTCGCCATCAATCCCGAGTCGCTGAACGGCGTCTACGGTGGCAGCAAGGCGTTCGTCGTC
GCCTTCAGCCAGAACCTGCGGCACGAACTCGCGGGAACCGGGGTCAGGGTGCAGGTCGTCCTTCCGGGTGCCACCGCCAC
GGACTTCTGGGCAATCGCCGGTCGCCCGGTCGAGAAGCTGCCAAAAGCCATCGTGATGCGAAGCGAGGATCTGGTCGATG
CGGCGCTTGCCGGACTCGATCGGGGCGAGTTCGCCACCATCCCTTCCCTCCAGGATAGTGAACTCTTCGACGCCTACGAG
GCCGCTCGGCAGGCGATGATCGGCAAGCTTTCTACTGCCACGCCGGCGCCCCGTTATCGGATTGCGACCCAGCCCTCTTC
AATCAACAAAAATGGCGATCGAACCAGTTAG

Upstream 100 bases:

>100_bases
ATTGATGGCTGGCGCGCAAAACCCACTGCTACTAAATTCATCGGCCTTGCTAGACGTCGCCGGAGCGTGGCGCCTCGCGG
ATGAATGAGGAGTCACGAGG

Downstream 100 bases:

>100_bases
AAGTGGCCTGCTCCGCCGCGGAGCAGGAAGGGCGGCGTTAGGAAAGGACGTGATATGACGCGGTTGTATCTGGACGATCT
CGAGCGCGGTCAAACCTTCG

Product: short-chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSVGTAVITGASGGIGAVYVDRLAERGYDLVLVARNGDKLTQVANRVRAKTGRKIDTLSADLANASDLARVEAFLRETPD
VTLLVNNAGLGGALKLLDSDVDQMTSLISLNVTALTRLTYAIVPGFVARAAGTIINIASIVAINPESLNGVYGGSKAFVV
AFSQNLRHELAGTGVRVQVVLPGATATDFWAIAGRPVEKLPKAIVMRSEDLVDAALAGLDRGEFATIPSLQDSELFDAYE
AARQAMIGKLSTATPAPRYRIATQPSSINKNGDRTS

Sequences:

>Translated_276_residues
MSVGTAVITGASGGIGAVYVDRLAERGYDLVLVARNGDKLTQVANRVRAKTGRKIDTLSADLANASDLARVEAFLRETPD
VTLLVNNAGLGGALKLLDSDVDQMTSLISLNVTALTRLTYAIVPGFVARAAGTIINIASIVAINPESLNGVYGGSKAFVV
AFSQNLRHELAGTGVRVQVVLPGATATDFWAIAGRPVEKLPKAIVMRSEDLVDAALAGLDRGEFATIPSLQDSELFDAYE
AARQAMIGKLSTATPAPRYRIATQPSSINKNGDRTS
>Mature_275_residues
SVGTAVITGASGGIGAVYVDRLAERGYDLVLVARNGDKLTQVANRVRAKTGRKIDTLSADLANASDLARVEAFLRETPDV
TLLVNNAGLGGALKLLDSDVDQMTSLISLNVTALTRLTYAIVPGFVARAAGTIINIASIVAINPESLNGVYGGSKAFVVA
FSQNLRHELAGTGVRVQVVLPGATATDFWAIAGRPVEKLPKAIVMRSEDLVDAALAGLDRGEFATIPSLQDSELFDAYEA
ARQAMIGKLSTATPAPRYRIATQPSSINKNGDRTS

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4557649, Length=186, Percent_Identity=36.5591397849462, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI7705855, Length=188, Percent_Identity=34.5744680851064, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI226371731, Length=185, Percent_Identity=30.8108108108108, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI7706318, Length=186, Percent_Identity=32.7956989247312, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI109715829, Length=226, Percent_Identity=29.646017699115, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI40254992, Length=185, Percent_Identity=29.7297297297297, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI20149619, Length=189, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787820, Length=179, Percent_Identity=33.5195530726257, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787335, Length=188, Percent_Identity=29.7872340425532, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082160, Length=188, Percent_Identity=26.5957446808511, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87082100, Length=188, Percent_Identity=28.1914893617021, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787526, Length=187, Percent_Identity=29.9465240641711, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI25152911, Length=191, Percent_Identity=31.413612565445, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71994604, Length=193, Percent_Identity=34.1968911917098, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17559552, Length=198, Percent_Identity=30.3030303030303, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=197, Percent_Identity=34.010152284264, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17557668, Length=198, Percent_Identity=28.2828282828283, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560176, Length=190, Percent_Identity=28.9473684210526, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI212646214, Length=190, Percent_Identity=29.4736842105263, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=218, Percent_Identity=30.7339449541284, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=203, Percent_Identity=28.0788177339901, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=211, Percent_Identity=32.7014218009479, Blast_Score=88, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6319635, Length=189, Percent_Identity=28.042328042328, Blast_Score=79, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6322067, Length=186, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=6e-13,
Organism=Drosophila melanogaster, GI161076933, Length=185, Percent_Identity=35.6756756756757, Blast_Score=107, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24584748, Length=185, Percent_Identity=35.6756756756757, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24584744, Length=198, Percent_Identity=33.8383838383838, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28574402, Length=198, Percent_Identity=33.8383838383838, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24640442, Length=195, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI28571526, Length=199, Percent_Identity=34.6733668341709, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21357041, Length=187, Percent_Identity=35.2941176470588, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI23397609, Length=184, Percent_Identity=32.6086956521739, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24584752, Length=188, Percent_Identity=30.8510638297872, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24644339, Length=199, Percent_Identity=32.6633165829146, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24648693, Length=243, Percent_Identity=28.3950617283951, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355889, Length=243, Percent_Identity=28.3950617283951, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007236, Length=242, Percent_Identity=27.6859504132231, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24648944, Length=224, Percent_Identity=29.0178571428571, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24641232, Length=246, Percent_Identity=28.0487804878049, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28953; Mature: 28822

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVGTAVITGASGGIGAVYVDRLAERGYDLVLVARNGDKLTQVANRVRAKTGRKIDTLSA
CCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEHHHH
DLANASDLARVEAFLRETPDVTLLVNNAGLGGALKLLDSDVDQMTSLISLNVTALTRLTY
HHCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHHHH
AIVPGFVARAAGTIINIASIVAINPESLNGVYGGSKAFVVAFSQNLRHELAGTGVRVQVV
HHHHHHHHHHHHHHEEEEEEEEECHHHCCCCCCCCCEEEEEECHHHHHHHCCCCEEEEEE
LPGATATDFWAIAGRPVEKLPKAIVMRSEDLVDAALAGLDRGEFATIPSLQDSELFDAYE
ECCCCCCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHH
AARQAMIGKLSTATPAPRYRIATQPSSINKNGDRTS
HHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SVGTAVITGASGGIGAVYVDRLAERGYDLVLVARNGDKLTQVANRVRAKTGRKIDTLSA
CCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEHHHH
DLANASDLARVEAFLRETPDVTLLVNNAGLGGALKLLDSDVDQMTSLISLNVTALTRLTY
HHCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHHHH
AIVPGFVARAAGTIINIASIVAINPESLNGVYGGSKAFVVAFSQNLRHELAGTGVRVQVV
HHHHHHHHHHHHHHEEEEEEEEECHHHCCCCCCCCCEEEEEECHHHHHHHCCCCEEEEEE
LPGATATDFWAIAGRPVEKLPKAIVMRSEDLVDAALAGLDRGEFATIPSLQDSELFDAYE
ECCCCCCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHH
AARQAMIGKLSTATPAPRYRIATQPSSINKNGDRTS
HHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]