| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475581
Identifier: 13475581
GI number: 13475581
Start: 5483199
End: 5483687
Strand: Reverse
Name: 13475581
Synonym: mll6687
Alternate gene names: NA
Gene position: 5483687-5483199 (Counterclockwise)
Preceding gene: 13475582
Following gene: 13475580
Centisome position: 77.94
GC content: 64.42
Gene sequence:
>489_bases GTGCGGCCGACGGTCCTCCTCGAAGGCTTCTTTCTTCAACTCGTTGCCCCCGGCGTGAGGGCCTCCGACGCGTTGGCGCT GCCCCTGGGGAGTGGAAAGACCTCGCCGATCTCGGCAGTCGACGTAGCGCGTGCGGTCGCGGCGATCCTCGACGACCCCG CACCGCATATCGGACAGATCTATGATCTGACAGGGTCGGAATCCACCGATCTCGACCACTATGCGCGCGTCTTCTCCGAG GCGCTCGGAAGGCCCATCGCATATCGGGACGTCCCACTCCCGGCGTGGAGCGAAGGGCTTCGGCAGGCGAAGTATCCAGA GCACGTCGTTCGCCATCTCTCGGCCATGGCCGAGTTGACCAAGCAGGGGCGTTACGACCGCATGACGGACACTCTGCGCA AACTCACCGGCGAAGCGCCGACGAATATGCGCGACTTCGTGAAGCTCCACGCCGCCGAGTTCAAGCAGCATGGACCGACG CCTTCCTGA
Upstream 100 bases:
>100_bases AGGCGAGCGAGTAGCCGTTCCACCAATTTCGTCGCGAGAATTGGAAAGGCCGGCGCAAAATGCGCAAGCCCTGTCCTGGT CGGGACGTCCGGTAGTAACC
Downstream 100 bases:
>100_bases GGCGCTCGGCGCGTCCCGCAAGCGGAATCCGATCCTTGAAGATCAGTACCGTCCGATGCCGGAGCAAGAATCGCTGCCTT GCCAAGTCGGGGAAGTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Hydroxylase; Nucleoside-Diphosphate Sugar Epimerase; NAD(P)H Azoreductase; NmrA-Like; Nucleotide-Diphosphate-Sugar Epimerase/NmrA Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Protein
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MRPTVLLEGFFLQLVAPGVRASDALALPLGSGKTSPISAVDVARAVAAILDDPAPHIGQIYDLTGSESTDLDHYARVFSE ALGRPIAYRDVPLPAWSEGLRQAKYPEHVVRHLSAMAELTKQGRYDRMTDTLRKLTGEAPTNMRDFVKLHAAEFKQHGPT PS
Sequences:
>Translated_162_residues MRPTVLLEGFFLQLVAPGVRASDALALPLGSGKTSPISAVDVARAVAAILDDPAPHIGQIYDLTGSESTDLDHYARVFSE ALGRPIAYRDVPLPAWSEGLRQAKYPEHVVRHLSAMAELTKQGRYDRMTDTLRKLTGEAPTNMRDFVKLHAAEFKQHGPT PS >Mature_162_residues MRPTVLLEGFFLQLVAPGVRASDALALPLGSGKTSPISAVDVARAVAAILDDPAPHIGQIYDLTGSESTDLDHYARVFSE ALGRPIAYRDVPLPAWSEGLRQAKYPEHVVRHLSAMAELTKQGRYDRMTDTLRKLTGEAPTNMRDFVKLHAAEFKQHGPT PS
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17687; Mature: 17687
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPTVLLEGFFLQLVAPGVRASDALALPLGSGKTSPISAVDVARAVAAILDDPAPHIGQI CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCE YDLTGSESTDLDHYARVFSEALGRPIAYRDVPLPAWSEGLRQAKYPEHVVRHLSAMAELT EECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH KQGRYDRMTDTLRKLTGEAPTNMRDFVKLHAAEFKQHGPTPS HCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRPTVLLEGFFLQLVAPGVRASDALALPLGSGKTSPISAVDVARAVAAILDDPAPHIGQI CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCE YDLTGSESTDLDHYARVFSEALGRPIAYRDVPLPAWSEGLRQAKYPEHVVRHLSAMAELT EECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH KQGRYDRMTDTLRKLTGEAPTNMRDFVKLHAAEFKQHGPTPS HCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA