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The map label for this gene is ydeM [H]

Identifier: 13475579

GI number: 13475579

Start: 5481577

End: 5482023

Strand: Reverse

Name: ydeM [H]

Synonym: mll6685

Alternate gene names: 13475579

Gene position: 5482023-5481577 (Counterclockwise)

Preceding gene: 13475580

Following gene: 13475574

Centisome position: 77.91

GC content: 61.52

Gene sequence:

>447_bases
ATGACGCGGTTGTATCTGGACGATCTCGAGCGCGGTCAAACCTTCGTCAGCGCTTCGCATGCGCTCGACGAGCAGCAGAT
CAAGGCTTTCGCAAGAGAGTTCGATCCCCAAATCTTCCATCTCGAACGGGCGGCGGAAGGGACGCTGTTCGGCGGACTTG
CGGCCAGCGGCTGGCATACCGCCGCGATCACAATGCGGCTGAACGTGGAGTCAGGCCTGCCGCTCGCCAACGGTATTATT
GGCGCCGGAGGCGAGATCAACTGGCCGAACCCGACGCGCCCGGGTGACATTCTTCACGTCGAAAGCGAGGTGATGGATAT
CGCTCCCTCGCGTTCGCGCCCAGAGCGTGGCATCGTCACCATCGTCAGCAAAACCCTCAACCAGCGTGGCGATGTTCTCC
AGATCCTGACCGCCAAGCTGGTCGTTTTTCGTCGGCCGGCGGCATGA

Upstream 100 bases:

>100_bases
GACCCAGCCCTCTTCAATCAACAAAAATGGCGATCGAACCAGTTAGAAGTGGCCTGCTCCGCCGCGGAGCAGGAAGGGCG
GCGTTAGGAAAGGACGTGAT

Downstream 100 bases:

>100_bases
GCGACCAGCCATTGCAACCAAAGGGAGTGACATGGGCAGCATCCAGAACGACGATCGCCGATGTCAAATTTGAGGCGACG
CGGCATTGCCGATGACGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTRLYLDDLERGQTFVSASHALDEQQIKAFAREFDPQIFHLERAAEGTLFGGLAASGWHTAAITMRLNVESGLPLANGII
GAGGEINWPNPTRPGDILHVESEVMDIAPSRSRPERGIVTIVSKTLNQRGDVLQILTAKLVVFRRPAA

Sequences:

>Translated_148_residues
MTRLYLDDLERGQTFVSASHALDEQQIKAFAREFDPQIFHLERAAEGTLFGGLAASGWHTAAITMRLNVESGLPLANGII
GAGGEINWPNPTRPGDILHVESEVMDIAPSRSRPERGIVTIVSKTLNQRGDVLQILTAKLVVFRRPAA
>Mature_147_residues
TRLYLDDLERGQTFVSASHALDEQQIKAFAREFDPQIFHLERAAEGTLFGGLAASGWHTAAITMRLNVESGLPLANGIIG
AGGEINWPNPTRPGDILHVESEVMDIAPSRSRPERGIVTIVSKTLNQRGDVLQILTAKLVVFRRPAA

Specific function: Unknown

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 16171; Mature: 16039

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLYLDDLERGQTFVSASHALDEQQIKAFAREFDPQIFHLERAAEGTLFGGLAASGWHT
CCEEEHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEHHHCCCCEECCCCCCCCEE
AAITMRLNVESGLPLANGIIGAGGEINWPNPTRPGDILHVESEVMDIAPSRSRPERGIVT
EEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEHHHHHHCCCCCCCCCCCHHH
IVSKTLNQRGDVLQILTAKLVVFRRPAA
HHHHHHCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRLYLDDLERGQTFVSASHALDEQQIKAFAREFDPQIFHLERAAEGTLFGGLAASGWHT
CEEEHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEHHHCCCCEECCCCCCCCEE
AAITMRLNVESGLPLANGIIGAGGEINWPNPTRPGDILHVESEVMDIAPSRSRPERGIVT
EEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEHHHHHHCCCCCCCCCCCHHH
IVSKTLNQRGDVLQILTAKLVVFRRPAA
HHHHHHCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]