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The map label for this gene is ycbK [H]

Identifier: 13475429

GI number: 13475429

Start: 5303052

End: 5304623

Strand: Direct

Name: ycbK [H]

Synonym: mlr6494

Alternate gene names: 13475429

Gene position: 5303052-5304623 (Clockwise)

Preceding gene: 13475428

Following gene: 13475430

Centisome position: 75.37

GC content: 66.86

Gene sequence:

>1572_bases
TTGCCGGCCATTGTCGTCGCGTTCCTTTGCCTGTGCGTCACCAGCGCGTTCGCCGAGACGCGTGCCTTGAAGATCCAGCA
TCTGCATACGGGCGAGAAGGCGGAGATCGTCTTCAAGCGCAACGGACGCTATGATCAGGCGGGATTGAAGAAGATCGATT
TCATGCTGCGCGACTGGCGCCGCAACGAGCCGACCAGGATGGATCCGCGCCTGCTCGATCTCGTCTGGCAGGCCTATCGC
GCCAGCGGCTCGAGCGCCTATATCCATGTCGTCAGCGCCTATCGCTCGCCGGCGACCAACGCCATGCTGCGCAGCCGCTC
GAAGGGCGTGGCGCGGGAAAGCCAGCACATGGTCGGCCGGGCCATGGACTTCTTCCTGCCGGACGTGCCGCTGAAGAAGC
TGCGCGACATCGGCCTCAAGATGCAGGGCGGTGGTGTTGGTTATTATCCGACCTCCGGCTCGCCTTTCATTCACATGGAC
GTCGGCAATGTGCGGCATTGGCCGGGCATCAGCCGCCAGGAACTCGCCAGGGTCTTCCCGAACGGCAACACGCTGCATGT
GCCGAGCGACGGCAGGCCGCTGCCCGGCTATGACCAGGCGCTTGCCGCCTACAAATCGCGCAAGGCTGCCGGCACGCCCA
ACATCGAGCTGGCTAGCGCCGACGGTGGTCAGCGCAAGTCGCGCGGCCTGCTGGCGACGCTTCTGGGCGGGCGCGGCGCC
AACGAGTCCGAGGACGTCGCGGAAGCAGCGCCCGCGCCACGCAAACCGGCCAAGTCCGTTGAACCCAAGAACGCCGGGCA
GGGCATCGCCATCGTGCCGCCGGAGGCAGCCCAACGGGCGGAGATGGCTTCCGCCGGTGCCGCCGAAGAACCGCTCGCTG
AGCAAAGCAGCAAGACGCCCGAAGCGGCCGTCATGGCCATGGCGCCCAGTGCGGTGCCATTGCCCGCCTTCGCCCCGCGC
GCCGAGCGGACCGCCAGCATACCGACGCCGCAAACCGCACCGGTCGCGATGGCCAGCGCGTTCACGGCGCAGGCCGAACT
CTCCGCGGCCAAGCCGGTTGTGGTCAATGCCGAAAGGCCCTTGGGCAAGACGGATGCCGCTGGCGCCAGCGTCGCGCCGG
ACGTGGTGGCGCTCAACATCCCGTTGCCGACATGGCGGCCGCAAAGCCAGACGAGCCCGGCGCGTCCGTCGGAAGCAGCC
AAATCCGCCGATGCCGTCGCTGCCTTGCTGGCCATGCATCACCCCGATACCGTCCTTGATGGATCGACCGCTCAGCAGCT
TGCCGTGCCGGCACCAAAACCCGAGGATCGCGTCAGGACCAGCCCCAAGGCCGATCGTGTCCAGCCACGTCTCGATCCCG
AAGCCACCGCCGTAATTGTGCCCGTGGGGACAGGTCGCGGCATTGTTGGCGGAGCCGGCACGGCAGCGGCGCCCGTCATT
GCGGCCAATTTCATCCGCACGGCGCCGGAGCAGGTCTATCTCGACGGATTCGAGCCACGAGGACAGACGTCCGATCACCG
CCGCTTCACCGGCTCCGCAGTGAAATTCCTGCCCATCGCCAGCTTCAAATAA

Upstream 100 bases:

>100_bases
GCGACGACGTCAAATCGTCCGAAACAAGAACAATGTGCAAGGCATGACCGTGATTGAAAGCGAACAGAACGCGCCCGGCG
CCTCCCATCGTTGGACATGG

Downstream 100 bases:

>100_bases
GGGGGCGAGCACTCCCGAGCGAATGCCATCCCGTCGCCATGGCATTGGCGGGACGCGGTGTGCCAATATCGGCATTTGCA
CTGGCGGCTCGCCTGTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MPAIVVAFLCLCVTSAFAETRALKIQHLHTGEKAEIVFKRNGRYDQAGLKKIDFMLRDWRRNEPTRMDPRLLDLVWQAYR
ASGSSAYIHVVSAYRSPATNAMLRSRSKGVARESQHMVGRAMDFFLPDVPLKKLRDIGLKMQGGGVGYYPTSGSPFIHMD
VGNVRHWPGISRQELARVFPNGNTLHVPSDGRPLPGYDQALAAYKSRKAAGTPNIELASADGGQRKSRGLLATLLGGRGA
NESEDVAEAAPAPRKPAKSVEPKNAGQGIAIVPPEAAQRAEMASAGAAEEPLAEQSSKTPEAAVMAMAPSAVPLPAFAPR
AERTASIPTPQTAPVAMASAFTAQAELSAAKPVVVNAERPLGKTDAAGASVAPDVVALNIPLPTWRPQSQTSPARPSEAA
KSADAVAALLAMHHPDTVLDGSTAQQLAVPAPKPEDRVRTSPKADRVQPRLDPEATAVIVPVGTGRGIVGGAGTAAAPVI
AANFIRTAPEQVYLDGFEPRGQTSDHRRFTGSAVKFLPIASFK

Sequences:

>Translated_523_residues
MPAIVVAFLCLCVTSAFAETRALKIQHLHTGEKAEIVFKRNGRYDQAGLKKIDFMLRDWRRNEPTRMDPRLLDLVWQAYR
ASGSSAYIHVVSAYRSPATNAMLRSRSKGVARESQHMVGRAMDFFLPDVPLKKLRDIGLKMQGGGVGYYPTSGSPFIHMD
VGNVRHWPGISRQELARVFPNGNTLHVPSDGRPLPGYDQALAAYKSRKAAGTPNIELASADGGQRKSRGLLATLLGGRGA
NESEDVAEAAPAPRKPAKSVEPKNAGQGIAIVPPEAAQRAEMASAGAAEEPLAEQSSKTPEAAVMAMAPSAVPLPAFAPR
AERTASIPTPQTAPVAMASAFTAQAELSAAKPVVVNAERPLGKTDAAGASVAPDVVALNIPLPTWRPQSQTSPARPSEAA
KSADAVAALLAMHHPDTVLDGSTAQQLAVPAPKPEDRVRTSPKADRVQPRLDPEATAVIVPVGTGRGIVGGAGTAAAPVI
AANFIRTAPEQVYLDGFEPRGQTSDHRRFTGSAVKFLPIASFK
>Mature_522_residues
PAIVVAFLCLCVTSAFAETRALKIQHLHTGEKAEIVFKRNGRYDQAGLKKIDFMLRDWRRNEPTRMDPRLLDLVWQAYRA
SGSSAYIHVVSAYRSPATNAMLRSRSKGVARESQHMVGRAMDFFLPDVPLKKLRDIGLKMQGGGVGYYPTSGSPFIHMDV
GNVRHWPGISRQELARVFPNGNTLHVPSDGRPLPGYDQALAAYKSRKAAGTPNIELASADGGQRKSRGLLATLLGGRGAN
ESEDVAEAAPAPRKPAKSVEPKNAGQGIAIVPPEAAQRAEMASAGAAEEPLAEQSSKTPEAAVMAMAPSAVPLPAFAPRA
ERTASIPTPQTAPVAMASAFTAQAELSAAKPVVVNAERPLGKTDAAGASVAPDVVALNIPLPTWRPQSQTSPARPSEAAK
SADAVAALLAMHHPDTVLDGSTAQQLAVPAPKPEDRVRTSPKADRVQPRLDPEATAVIVPVGTGRGIVGGAGTAAAPVIA
ANFIRTAPEQVYLDGFEPRGQTSDHRRFTGSAVKFLPIASFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=147, Percent_Identity=40.8163265306122, Blast_Score=119, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 55319; Mature: 55187

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAIVVAFLCLCVTSAFAETRALKIQHLHTGEKAEIVFKRNGRYDQAGLKKIDFMLRDWR
CHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH
RNEPTRMDPRLLDLVWQAYRASGSSAYIHVVSAYRSPATNAMLRSRSKGVARESQHMVGR
CCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHCCCHHHHHHHHHHCCHHHHHHHHHHH
AMDFFLPDVPLKKLRDIGLKMQGGGVGYYPTSGSPFIHMDVGNVRHWPGISRQELARVFP
HHHHHCCCCCHHHHHHCCCEEECCEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHCC
NGNTLHVPSDGRPLPGYDQALAAYKSRKAAGTPNIELASADGGQRKSRGLLATLLGGRGA
CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHCCHHEEECCCCCC
NESEDVAEAAPAPRKPAKSVEPKNAGQGIAIVPPEAAQRAEMASAGAAEEPLAEQSSKTP
CCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHCCCCC
EAAVMAMAPSAVPLPAFAPRAERTASIPTPQTAPVAMASAFTAQAELSAAKPVVVNAERP
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCC
LGKTDAAGASVAPDVVALNIPLPTWRPQSQTSPARPSEAAKSADAVAALLAMHHPDTVLD
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEC
GSTAQQLAVPAPKPEDRVRTSPKADRVQPRLDPEATAVIVPVGTGRGIVGGAGTAAAPVI
CCCHHHEECCCCCCHHHHCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHH
AANFIRTAPEQVYLDGFEPRGQTSDHRRFTGSAVKFLPIASFK
HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
PAIVVAFLCLCVTSAFAETRALKIQHLHTGEKAEIVFKRNGRYDQAGLKKIDFMLRDWR
HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH
RNEPTRMDPRLLDLVWQAYRASGSSAYIHVVSAYRSPATNAMLRSRSKGVARESQHMVGR
CCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHCCCHHHHHHHHHHCCHHHHHHHHHHH
AMDFFLPDVPLKKLRDIGLKMQGGGVGYYPTSGSPFIHMDVGNVRHWPGISRQELARVFP
HHHHHCCCCCHHHHHHCCCEEECCEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHCC
NGNTLHVPSDGRPLPGYDQALAAYKSRKAAGTPNIELASADGGQRKSRGLLATLLGGRGA
CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHCCHHEEECCCCCC
NESEDVAEAAPAPRKPAKSVEPKNAGQGIAIVPPEAAQRAEMASAGAAEEPLAEQSSKTP
CCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHCCCCC
EAAVMAMAPSAVPLPAFAPRAERTASIPTPQTAPVAMASAFTAQAELSAAKPVVVNAERP
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCC
LGKTDAAGASVAPDVVALNIPLPTWRPQSQTSPARPSEAAKSADAVAALLAMHHPDTVLD
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEC
GSTAQQLAVPAPKPEDRVRTSPKADRVQPRLDPEATAVIVPVGTGRGIVGGAGTAAAPVI
CCCHHHEECCCCCCHHHHCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHH
AANFIRTAPEQVYLDGFEPRGQTSDHRRFTGSAVKFLPIASFK
HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]