| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475428
Identifier: 13475428
GI number: 13475428
Start: 5301639
End: 5302781
Strand: Direct
Name: 13475428
Synonym: mlr6493
Alternate gene names: NA
Gene position: 5301639-5302781 (Clockwise)
Preceding gene: 13475426
Following gene: 13475429
Centisome position: 75.35
GC content: 59.41
Gene sequence:
>1143_bases ATGGCACTTCACCTTTCGGCAGATACCCCGGCCTCAGTCGCGGCCGCTCCGCAAAAATATCTCTTTGGCCCGTTCATCGA CTTCTTCATGCTTGGCGGAAGCGCGCTTCTCATCCTGCCGGTCCTGTATTTTCTGCCGCTCCGGTACGAAGCCACCGTGA CGCTGACGATGTTCTTGCTCTCGCACCTCATAAACCAGCCGCATTTCGGTCATTCGTACCAGATCTTCTACCGCAATTTC GCGCGCAAGATGCGTGGCGACGGCTACAGCCGGAGCCTTCAGATCCGCTATATTCTCGCCGGCATTGTCGTCCCGCTGGC CATGTTTGCCTTCTTTGCCTATGGCTCGCTGACGAGCAACGCCCGGTTGCTCGGCAATGCGACCAACGCCATGGGCTTTT TCGTCGGCTGGCACTATGTCAAGCAGGGCTACGGCATGCTGATGGTGGATGCCGTGCTGAAGCGCAAATTCTTCAGCGAT CAGGACAAGAAGGTGTTGTTGTTCAACGGCTACGCCGTCTGGCTGTTCGCCTGGCTCCAGACGAATGTGGTGATCACCCA AAGGCAGTTCTGGGGCCTGGACTATTACACCTTCGCGGTGCCGCCATGGCTCATCACCATCGCCATGGCGATAGCTGCCG CCTCGTCGGCGGCGACCGCCGTGATGTTCATCAACCGCTGGCGCAAACATGGTGGCGCGCTGCCCTATAACGGCGTCGTC GCCTACGTCGTGTCCCTCTATGCCTGGATCCTGTTCGTGACGCTGAACCCGCTCTGGCTGCTCGTGGTGCCGGCGATGCA TTCGTTGCAGTACCTGGCCGTGGTCTGGCGCTACCAGACCAATGTCGAGCGCGACCGTGCGGATGCCGTCGAGAGGCCGG CATTGAAGGCCCTGTCCGTTCTTGGACCGCTATACAGGCTGCGCGTGCTGGCGTTCGTGGTCTTCGGCGGAATTCTTGGA GCGCTCGGTTTCTGGCTGGTGCCGATGGCGTTGACCGACCTGGTTCCCTACGACAAGGCGGAGTTCGGCTCGTCGCTTTT CCTCTTCATCGCCTGGATCTTCATCAACGTGCACCACTACTTCCTGGACAATGTGATGTGGCGGCGCGGCAATCCGGAAG TCTCGAAATATCTGTTCCGCTGA
Upstream 100 bases:
>100_bases CATAATTAGTTCTTAAGCAAATACGTCCTGCCGCTGGTCGGATGCAATCGACGGCCTATCTACCCGCGACGACGTTCTGA TCACAGGGGGAGAAGGCACC
Downstream 100 bases:
>100_bases AGCGATCGGCTGAATTCACTCCAGGCAACCCGCCGCTGTCGGGGACGCCCATTCCGGCGCGAACACGATTCGTTAACCAA GATGCTGTTCATCGACGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MALHLSADTPASVAAAPQKYLFGPFIDFFMLGGSALLILPVLYFLPLRYEATVTLTMFLLSHLINQPHFGHSYQIFYRNF ARKMRGDGYSRSLQIRYILAGIVVPLAMFAFFAYGSLTSNARLLGNATNAMGFFVGWHYVKQGYGMLMVDAVLKRKFFSD QDKKVLLFNGYAVWLFAWLQTNVVITQRQFWGLDYYTFAVPPWLITIAMAIAAASSAATAVMFINRWRKHGGALPYNGVV AYVVSLYAWILFVTLNPLWLLVVPAMHSLQYLAVVWRYQTNVERDRADAVERPALKALSVLGPLYRLRVLAFVVFGGILG ALGFWLVPMALTDLVPYDKAEFGSSLFLFIAWIFINVHHYFLDNVMWRRGNPEVSKYLFR
Sequences:
>Translated_380_residues MALHLSADTPASVAAAPQKYLFGPFIDFFMLGGSALLILPVLYFLPLRYEATVTLTMFLLSHLINQPHFGHSYQIFYRNF ARKMRGDGYSRSLQIRYILAGIVVPLAMFAFFAYGSLTSNARLLGNATNAMGFFVGWHYVKQGYGMLMVDAVLKRKFFSD QDKKVLLFNGYAVWLFAWLQTNVVITQRQFWGLDYYTFAVPPWLITIAMAIAAASSAATAVMFINRWRKHGGALPYNGVV AYVVSLYAWILFVTLNPLWLLVVPAMHSLQYLAVVWRYQTNVERDRADAVERPALKALSVLGPLYRLRVLAFVVFGGILG ALGFWLVPMALTDLVPYDKAEFGSSLFLFIAWIFINVHHYFLDNVMWRRGNPEVSKYLFR >Mature_379_residues ALHLSADTPASVAAAPQKYLFGPFIDFFMLGGSALLILPVLYFLPLRYEATVTLTMFLLSHLINQPHFGHSYQIFYRNFA RKMRGDGYSRSLQIRYILAGIVVPLAMFAFFAYGSLTSNARLLGNATNAMGFFVGWHYVKQGYGMLMVDAVLKRKFFSDQ DKKVLLFNGYAVWLFAWLQTNVVITQRQFWGLDYYTFAVPPWLITIAMAIAAASSAATAVMFINRWRKHGGALPYNGVVA YVVSLYAWILFVTLNPLWLLVVPAMHSLQYLAVVWRYQTNVERDRADAVERPALKALSVLGPLYRLRVLAFVVFGGILGA LGFWLVPMALTDLVPYDKAEFGSSLFLFIAWIFINVHHYFLDNVMWRRGNPEVSKYLFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43236; Mature: 43104
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALHLSADTPASVAAAPQKYLFGPFIDFFMLGGSALLILPVLYFLPLRYEATVTLTMFLL CEEEECCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH SHLINQPHFGHSYQIFYRNFARKMRGDGYSRSLQIRYILAGIVVPLAMFAFFAYGSLTSN HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCC ARLLGNATNAMGFFVGWHYVKQGYGMLMVDAVLKRKFFSDQDKKVLLFNGYAVWLFAWLQ CEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH TNVVITQRQFWGLDYYTFAVPPWLITIAMAIAAASSAATAVMFINRWRKHGGALPYNGVV HCEEEEEHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AYVVSLYAWILFVTLNPLWLLVVPAMHSLQYLAVVWRYQTNVERDRADAVERPALKALSV HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LGPLYRLRVLAFVVFGGILGALGFWLVPMALTDLVPYDKAEFGSSLFLFIAWIFINVHHY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHH FLDNVMWRRGNPEVSKYLFR HHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure ALHLSADTPASVAAAPQKYLFGPFIDFFMLGGSALLILPVLYFLPLRYEATVTLTMFLL EEEECCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH SHLINQPHFGHSYQIFYRNFARKMRGDGYSRSLQIRYILAGIVVPLAMFAFFAYGSLTSN HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCC ARLLGNATNAMGFFVGWHYVKQGYGMLMVDAVLKRKFFSDQDKKVLLFNGYAVWLFAWLQ CEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH TNVVITQRQFWGLDYYTFAVPPWLITIAMAIAAASSAATAVMFINRWRKHGGALPYNGVV HCEEEEEHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AYVVSLYAWILFVTLNPLWLLVVPAMHSLQYLAVVWRYQTNVERDRADAVERPALKALSV HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LGPLYRLRVLAFVVFGGILGALGFWLVPMALTDLVPYDKAEFGSSLFLFIAWIFINVHHY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHH FLDNVMWRRGNPEVSKYLFR HHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA