Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475330

Identifier: 13475330

GI number: 13475330

Start: 5195919

End: 5196821

Strand: Direct

Name: 13475330

Synonym: mlr6370

Alternate gene names: NA

Gene position: 5195919-5196821 (Clockwise)

Preceding gene: 13475329

Following gene: 13475331

Centisome position: 73.85

GC content: 68.55

Gene sequence:

>903_bases
ATGATCCAGACCGAACGCGCGCTGCAGCAGGTGCTGGAGTGGGGGCGTTCCCTGACAGGGTTCGCCGACGAGCATGCCGT
GGAAGCGGTCAGGGGCGGCCAGTACATCCTGCAGCGCATCCACCCGAGCCTGCGCGACACCTGCGCCCGCACTGGCCGCG
ATCCGCAGGCCGAAACGCTGATCGTGGCGTTCTATCGCGAACTGGCGCTGCTGTTCTGGCTCGACGATTGCAACGACCTT
GGCCTGATCGCGCCGGAGGAGCTCGCCGCGGTGGAGCAGGCGCTGGGGCAGGGCGTGCCGTGCGCGCTCCCCGGATTCGA
GGGCTGCGCTGCTCTGCGCGCTTCGCTGGCCGCGCTTGCCTACGATCGTCGCGACTATGCTCGGCTGCTCGACGACACTC
GGTGCTACTGCGCGGCGCTGCGCGCCGGACACGCGCAGGCGGTAGGGGCGGAACGCTGGTCCTACGCCGAGTACCTGCAC
AACGGCATCGATTCGATCGCCTACACGAACGTGTTCTGTTGCCTGTCGTTGCTGTGGGGGCTGGACATGGCGACCTTGCG
CGCGCGTCCGGCGTTTCGCCAGGTCCTGCGGCTCATCTCCGCGATAGGGCGCCTGCAGAACGATCTGCATGGACGCGACA
AGGACAGGTCGGCGGGCGAGGCCGACAACGCGGCGATCCTGCTGCGGCAGCGCTATCCGGCTATGCCTGTGGTGGAGTTC
CTCAACGACGAGTTGGCCGGCCATACGCGCATGCTGCACCGGGTGATGGCGGAAGAACGCTTTCCCGCGCCGTGGGGAGC
GTTGATCGAGGCCATGGCGGCCATCCGCGCGCAGTACTACCAGACCTCGACCAGCCGCTACCCCAGCGACGCTGCGGGGG
GAGGCCAGCGTGCGCCCGCCTGA

Upstream 100 bases:

>100_bases
ATTGCCCCACCCGGGTCGTGCGGGTGGCCGAACTCGCCGGGTTGTGGCTGGCGCTTCGTTGGGGGCGGCGCGTCCTGGCC
GAGGGAGCAGGAGCGGCGCC

Downstream 100 bases:

>100_bases
ACGGCGGGATGCGGCTGCGTGCGCGCGCTGCCGTCGGTCCGATCCGATGCAACGCCGTCCCCCGATGCGACGGATGGAGC
GAGCATGAGCGATAGCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MIQTERALQQVLEWGRSLTGFADEHAVEAVRGGQYILQRIHPSLRDTCARTGRDPQAETLIVAFYRELALLFWLDDCNDL
GLIAPEELAAVEQALGQGVPCALPGFEGCAALRASLAALAYDRRDYARLLDDTRCYCAALRAGHAQAVGAERWSYAEYLH
NGIDSIAYTNVFCCLSLLWGLDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLRQRYPAMPVVEF
LNDELAGHTRMLHRVMAEERFPAPWGALIEAMAAIRAQYYQTSTSRYPSDAAGGGQRAPA

Sequences:

>Translated_300_residues
MIQTERALQQVLEWGRSLTGFADEHAVEAVRGGQYILQRIHPSLRDTCARTGRDPQAETLIVAFYRELALLFWLDDCNDL
GLIAPEELAAVEQALGQGVPCALPGFEGCAALRASLAALAYDRRDYARLLDDTRCYCAALRAGHAQAVGAERWSYAEYLH
NGIDSIAYTNVFCCLSLLWGLDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLRQRYPAMPVVEF
LNDELAGHTRMLHRVMAEERFPAPWGALIEAMAAIRAQYYQTSTSRYPSDAAGGGQRAPA
>Mature_300_residues
MIQTERALQQVLEWGRSLTGFADEHAVEAVRGGQYILQRIHPSLRDTCARTGRDPQAETLIVAFYRELALLFWLDDCNDL
GLIAPEELAAVEQALGQGVPCALPGFEGCAALRASLAALAYDRRDYARLLDDTRCYCAALRAGHAQAVGAERWSYAEYLH
NGIDSIAYTNVFCCLSLLWGLDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLRQRYPAMPVVEF
LNDELAGHTRMLHRVMAEERFPAPWGALIEAMAAIRAQYYQTSTSRYPSDAAGGGQRAPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008949 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33181; Mature: 33181

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQTERALQQVLEWGRSLTGFADEHAVEAVRGGQYILQRIHPSLRDTCARTGRDPQAETL
CCCHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHH
IVAFYRELALLFWLDDCNDLGLIAPEELAAVEQALGQGVPCALPGFEGCAALRASLAALA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
YDRRDYARLLDDTRCYCAALRAGHAQAVGAERWSYAEYLHNGIDSIAYTNVFCCLSLLWG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLRQRYPAMPVVEF
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHCCCCCHHHHH
LNDELAGHTRMLHRVMAEERFPAPWGALIEAMAAIRAQYYQTSTSRYPSDAAGGGQRAPA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIQTERALQQVLEWGRSLTGFADEHAVEAVRGGQYILQRIHPSLRDTCARTGRDPQAETL
CCCHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHH
IVAFYRELALLFWLDDCNDLGLIAPEELAAVEQALGQGVPCALPGFEGCAALRASLAALA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
YDRRDYARLLDDTRCYCAALRAGHAQAVGAERWSYAEYLHNGIDSIAYTNVFCCLSLLWG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLRQRYPAMPVVEF
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHCCCCCHHHHH
LNDELAGHTRMLHRVMAEERFPAPWGALIEAMAAIRAQYYQTSTSRYPSDAAGGGQRAPA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]