| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475325
Identifier: 13475325
GI number: 13475325
Start: 5189213
End: 5190502
Strand: Direct
Name: 13475325
Synonym: mlr6365
Alternate gene names: NA
Gene position: 5189213-5190502 (Clockwise)
Preceding gene: 13475324
Following gene: 13475326
Centisome position: 73.75
GC content: 66.82
Gene sequence:
>1290_bases ATGGACGTGCAAGAAACCACGGCAGCATGCCGGGACGCCTTCGCCGAACTTGCGTCGCCAGCGTGTATCCAAGACCCGTA TACGTTCATGCGGTGGTTGCGCGAGCACGATCCGGTGCATCGTGCGGCGTCGGGCCTCTTTCTGTTGAGCCGCCACGCCG ACATCTACTGGGCGCTCAAGGCCACGGGCGATGTGTTTCGGGGACCGGCGCCGGGCGAACTGGCGCGCTATTTCCCGCGT GCGGAGACCAGCCTGTCACTCAATCTCCTCGCGTCCACGCTAGCGATGAAGGAACCACCGACGCATACGCGTCTGCGCCG GCTGATCTCGCGCGATTTCACCATACGCCAGATCGACAACCTGCGGCCGAGCATCGCACGCATCGTCGCAGCGCGCCTGG ACGGCATGGCGCCCGCGCTGGAGCGCGGGGAGGCGGTGGACCTGCATTGGGAATTCGCGCTGGCTGTGCCCATTCTGGTC TTCGCCGAACTGTTCGGCATGCCCCAGGATGACATGTTCGGGCTCGCCGCCGGCATCGGCGCCATTCTGGAAGGCCTGAG CCCACACGCCAGCGATCCCCAGCTCGCCGAGGCGGACGCGGCCAGCGCGAGGGTGCAGGCCTACTTCGGCGACCTCATAC AGCGCAAGCGCACCGATCCCCGCAACGACATCGTGTCGATGGTGGTCGGCGCACACGACGACGATGCCGACACGCTGTCG GATGCGGAGTTGATCAGCATGCTGTGGGGCATGCTGCTGGGCGGCTTCGCCACCACTGCTGCGACCATCGACCATGCGGT CCTAGCGATGCTGGCGTATCCCGAACAGCGGCACTGGCTGCAGGGAGACGCCGTGGGGGTGAAGGCATTCGTCGAAGAAG TCCTGCGCTGCGACGCGCCTGCCATGTTCAGCTCCATCCCGCGTATCGCCCAGCGCGACATCGAACTGGGCGGCGTGGTG ATCCCGAAGAACGCGGACGTGCGCGTGCTGATCGCGGCCGGCAATCGCGACCCGGACGCCTTCTCCGATCCCGACCGCTT CGATCCCGCGCGGTTCTACGGCACCACTCCTGGCATGTCGACCGACGGGAAGATCATGCTGAGCTTTGGCCACGGCATCC ACTTCTGCCTCGGTGCGCAACTGGCCCGGGTGCAGTTGGCCGAGAGCCTGCCGCGGATCGAGGCGCGCTTCCCCACGCTG GCATTGGCCGAGCAGCCGACCCGGGAGCCATCCGCGTTCCTCAGGACGTTCCGCGCGCTGCCGGTGCGACTGCATGCTCA GGGGGGCTGA
Upstream 100 bases:
>100_bases TGGTGACGCGCGGACGCCGCCCGGAATCGCGATCTACTCCGCAATTTGCCGGCGCGCCCAGCGCGCGCCGGTCAGATCAG CCAGCCAACAGGTAACCAAG
Downstream 100 bases:
>100_bases GATGCGCGTCGTGATCGATCAGGATCTATGCGGAACCACCGGGCAGTGTGTGCTGACGCTGCCGGGCACCTTTCGCCAGC GCGAACCGGACGGCGTGGCG
Product: cytochrome P-450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MDVQETTAACRDAFAELASPACIQDPYTFMRWLREHDPVHRAASGLFLLSRHADIYWALKATGDVFRGPAPGELARYFPR AETSLSLNLLASTLAMKEPPTHTRLRRLISRDFTIRQIDNLRPSIARIVAARLDGMAPALERGEAVDLHWEFALAVPILV FAELFGMPQDDMFGLAAGIGAILEGLSPHASDPQLAEADAASARVQAYFGDLIQRKRTDPRNDIVSMVVGAHDDDADTLS DAELISMLWGMLLGGFATTAATIDHAVLAMLAYPEQRHWLQGDAVGVKAFVEEVLRCDAPAMFSSIPRIAQRDIELGGVV IPKNADVRVLIAAGNRDPDAFSDPDRFDPARFYGTTPGMSTDGKIMLSFGHGIHFCLGAQLARVQLAESLPRIEARFPTL ALAEQPTREPSAFLRTFRALPVRLHAQGG
Sequences:
>Translated_429_residues MDVQETTAACRDAFAELASPACIQDPYTFMRWLREHDPVHRAASGLFLLSRHADIYWALKATGDVFRGPAPGELARYFPR AETSLSLNLLASTLAMKEPPTHTRLRRLISRDFTIRQIDNLRPSIARIVAARLDGMAPALERGEAVDLHWEFALAVPILV FAELFGMPQDDMFGLAAGIGAILEGLSPHASDPQLAEADAASARVQAYFGDLIQRKRTDPRNDIVSMVVGAHDDDADTLS DAELISMLWGMLLGGFATTAATIDHAVLAMLAYPEQRHWLQGDAVGVKAFVEEVLRCDAPAMFSSIPRIAQRDIELGGVV IPKNADVRVLIAAGNRDPDAFSDPDRFDPARFYGTTPGMSTDGKIMLSFGHGIHFCLGAQLARVQLAESLPRIEARFPTL ALAEQPTREPSAFLRTFRALPVRLHAQGG >Mature_429_residues MDVQETTAACRDAFAELASPACIQDPYTFMRWLREHDPVHRAASGLFLLSRHADIYWALKATGDVFRGPAPGELARYFPR AETSLSLNLLASTLAMKEPPTHTRLRRLISRDFTIRQIDNLRPSIARIVAARLDGMAPALERGEAVDLHWEFALAVPILV FAELFGMPQDDMFGLAAGIGAILEGLSPHASDPQLAEADAASARVQAYFGDLIQRKRTDPRNDIVSMVVGAHDDDADTLS DAELISMLWGMLLGGFATTAATIDHAVLAMLAYPEQRHWLQGDAVGVKAFVEEVLRCDAPAMFSSIPRIAQRDIELGGVV IPKNADVRVLIAAGNRDPDAFSDPDRFDPARFYGTTPGMSTDGKIMLSFGHGIHFCLGAQLARVQLAESLPRIEARFPTL ALAEQPTREPSAFLRTFRALPVRLHAQGG
Specific function: Cytochromes P450 are a group of heme-thiolate monooxygenases. They oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI4503213, Length=206, Percent_Identity=27.1844660194175, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI19743565, Length=199, Percent_Identity=28.1407035175879, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 46887; Mature: 46887
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVQETTAACRDAFAELASPACIQDPYTFMRWLREHDPVHRAASGLFLLSRHADIYWALK CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHEEEECCCCEEEEEE ATGDVFRGPAPGELARYFPRAETSLSLNLLASTLAMKEPPTHTRLRRLISRDFTIRQIDN CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHC LRPSIARIVAARLDGMAPALERGEAVDLHWEFALAVPILVFAELFGMPQDDMFGLAAGIG CCHHHHHHHHHHHHCCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AILEGLSPHASDPQLAEADAASARVQAYFGDLIQRKRTDPRNDIVSMVVGAHDDDADTLS HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH DAELISMLWGMLLGGFATTAATIDHAVLAMLAYPEQRHWLQGDAVGVKAFVEEVLRCDAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCCC AMFSSIPRIAQRDIELGGVVIPKNADVRVLIAAGNRDPDAFSDPDRFDPARFYGTTPGMS HHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHEECCCCCCC TDGKIMLSFGHGIHFCLGAQLARVQLAESLPRIEARFPTLALAEQPTREPSAFLRTFRAL CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCEECCCCCCCHHHHHHHHHHC PVRLHAQGG CEEEEECCC >Mature Secondary Structure MDVQETTAACRDAFAELASPACIQDPYTFMRWLREHDPVHRAASGLFLLSRHADIYWALK CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHEEEECCCCEEEEEE ATGDVFRGPAPGELARYFPRAETSLSLNLLASTLAMKEPPTHTRLRRLISRDFTIRQIDN CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHC LRPSIARIVAARLDGMAPALERGEAVDLHWEFALAVPILVFAELFGMPQDDMFGLAAGIG CCHHHHHHHHHHHHCCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AILEGLSPHASDPQLAEADAASARVQAYFGDLIQRKRTDPRNDIVSMVVGAHDDDADTLS HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH DAELISMLWGMLLGGFATTAATIDHAVLAMLAYPEQRHWLQGDAVGVKAFVEEVLRCDAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCCC AMFSSIPRIAQRDIELGGVVIPKNADVRVLIAAGNRDPDAFSDPDRFDPARFYGTTPGMS HHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHEECCCCCCC TDGKIMLSFGHGIHFCLGAQLARVQLAESLPRIEARFPTLALAEQPTREPSAFLRTFRAL CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCEECCCCCCCHHHHHHHHHHC PVRLHAQGG CEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]