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The map label for this gene is hofQ [C]

Identifier: 13475294

GI number: 13475294

Start: 5149189

End: 5150487

Strand: Direct

Name: hofQ [C]

Synonym: mlr6335

Alternate gene names: 13475294

Gene position: 5149189-5150487 (Clockwise)

Preceding gene: 13475293

Following gene: 13475295

Centisome position: 73.18

GC content: 57.81

Gene sequence:

>1299_bases
ATGCAGGATCAAGGGGCGCCGCGTGCCGCTTCCAATAGCATCGACGGCACGCTGAACCTTTCCTCTTCGCTCGGCAAGAC
GGTTCATTTGCCCGCGCCTGCCACGACCATCTTTGTTGCTGACCCGACGATCGCTGATTATCAGGCAGCCTCAAATACAA
CGATCTTCGTCTTCGGGAAGAAATCCGGGCGGACCAGCCTGTTCGCCTTGGACGATAAGGGCGAGGCTCTCGCCGCGCTG
CGAATTGTCGTTACGCAACCGATCGAGGAATTGCGCGCCATGTTGATGGATCAGGTTGGCGACTCTTCAATCCAGGTGAG
CTATACGCCGCGCGGCGCAATCCTTAGCGGTACAGCGCCCAATGCGGAGGTCGCCGACACCGCAAAAAGGGTCACTGAGC
AGTATCTCGGGGACGGTGCGCAAGTCGTCAACAACATTAAGGTCGCTGGGTCCTTACAAGTTAATCTCAGTGTGCGCGTA
GCGGAGGTCTCCCGTAGCGCCATGAAGGCACTCGGCGTTAACCTGTCCGCCTTTGGTCAAATCGACAATTTCAGAGTGGG
CTTGTTAAGCGGCGGAGGCACTGGCTCTGGTGCAGCGCAGGGTGGTGGCACAGCAGGAATCGGATTCAACAACGGTGCCG
TCAACATCGGCGCGGTTCTAGACGCGCTCGCCAAGGAGCACATAGCTTCCGTGTTGGCTGAGCCGAATCTCACCGCGATG
TCCGGTGAAACTGCCAGCTTTCTCGCAGGTGGCGAATTTCCCATTCCTGTCCTGCAGGAAAACAAGCAAGTGTCGGTTGA
ATTCCGTCACTTCGGCGTCAGCCTGGAGTTCGTGCCGACCGTTCTCAACAACAACCGGATCAACATTCACGTAAAGCCGG
AGGTCAGTGAACTATCGTCCCAAGGTGCCGTTCAAATCAATGGTATTTCCGTGCCGGCAGTTTCCACGCGCCGAGCCGAC
ACAGTCGTCGAACTCGCCAGTGGGCAGAGCTTTGCAATTGGCGGTCTGATCAGGCGCAACGTGAACAATAATGTCAGTGC
GTTTCCCTGGCTCGGCGAAATGCCGATTCTTGGCGCTCTGTTTCGTTCCTCCTCGTTTCAAAAAGAAGAATCAGAACTTA
TAATTCTGGTTACGCCTTACATCGTAAAACCAGGCTCCAGCCCCAACCAGATGAGCGCACCCACGGACCGGATGGCGCCG
GCTTTGGACGATCCGCCGGCAGATCCGCCGCGAGGCCGCGCTGCTGCCCGCACCGGCGCGCCCGGGGCCAAGCGCGGTCG
CGGCTTCATAATTCAATAG

Upstream 100 bases:

>100_bases
GCACATCGTTTGCCCGAGACCTGCTACTGTTTCTCCTTACTTGGGCCGCCTTCTCTGTGCGCTCATTCTGGCATATCCAG
TTTCTGCCCCGGCCGAAAAC

Downstream 100 bases:

>100_bases
GTGATCGAATGACTTTGCGGATCAAAGTTCTCCTGGTCGCCCTGACAGCCAGCGCAAGTGGCTGCACAAGCACTGTGCCG
ATCTATGTCGAGCCCCCTGC

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MQDQGAPRAASNSIDGTLNLSSSLGKTVHLPAPATTIFVADPTIADYQAASNTTIFVFGKKSGRTSLFALDDKGEALAAL
RIVVTQPIEELRAMLMDQVGDSSIQVSYTPRGAILSGTAPNAEVADTAKRVTEQYLGDGAQVVNNIKVAGSLQVNLSVRV
AEVSRSAMKALGVNLSAFGQIDNFRVGLLSGGGTGSGAAQGGGTAGIGFNNGAVNIGAVLDALAKEHIASVLAEPNLTAM
SGETASFLAGGEFPIPVLQENKQVSVEFRHFGVSLEFVPTVLNNNRINIHVKPEVSELSSQGAVQINGISVPAVSTRRAD
TVVELASGQSFAIGGLIRRNVNNNVSAFPWLGEMPILGALFRSSSFQKEESELIILVTPYIVKPGSSPNQMSAPTDRMAP
ALDDPPADPPRGRAAARTGAPGAKRGRGFIIQ

Sequences:

>Translated_432_residues
MQDQGAPRAASNSIDGTLNLSSSLGKTVHLPAPATTIFVADPTIADYQAASNTTIFVFGKKSGRTSLFALDDKGEALAAL
RIVVTQPIEELRAMLMDQVGDSSIQVSYTPRGAILSGTAPNAEVADTAKRVTEQYLGDGAQVVNNIKVAGSLQVNLSVRV
AEVSRSAMKALGVNLSAFGQIDNFRVGLLSGGGTGSGAAQGGGTAGIGFNNGAVNIGAVLDALAKEHIASVLAEPNLTAM
SGETASFLAGGEFPIPVLQENKQVSVEFRHFGVSLEFVPTVLNNNRINIHVKPEVSELSSQGAVQINGISVPAVSTRRAD
TVVELASGQSFAIGGLIRRNVNNNVSAFPWLGEMPILGALFRSSSFQKEESELIILVTPYIVKPGSSPNQMSAPTDRMAP
ALDDPPADPPRGRAAARTGAPGAKRGRGFIIQ
>Mature_432_residues
MQDQGAPRAASNSIDGTLNLSSSLGKTVHLPAPATTIFVADPTIADYQAASNTTIFVFGKKSGRTSLFALDDKGEALAAL
RIVVTQPIEELRAMLMDQVGDSSIQVSYTPRGAILSGTAPNAEVADTAKRVTEQYLGDGAQVVNNIKVAGSLQVNLSVRV
AEVSRSAMKALGVNLSAFGQIDNFRVGLLSGGGTGSGAAQGGGTAGIGFNNGAVNIGAVLDALAKEHIASVLAEPNLTAM
SGETASFLAGGEFPIPVLQENKQVSVEFRHFGVSLEFVPTVLNNNRINIHVKPEVSELSSQGAVQINGISVPAVSTRRAD
TVVELASGQSFAIGGLIRRNVNNNVSAFPWLGEMPILGALFRSSSFQKEESELIILVTPYIVKPGSSPNQMSAPTDRMAP
ALDDPPADPPRGRAAARTGAPGAKRGRGFIIQ

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=236, Percent_Identity=31.3559322033898, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI87082242, Length=183, Percent_Identity=28.4153005464481, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 44868; Mature: 44868

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50914 BON ; PS00097 CARBAMOYLTRANSFERASE ; PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDQGAPRAASNSIDGTLNLSSSLGKTVHLPAPATTIFVADPTIADYQAASNTTIFVFGK
CCCCCCCCCCCCCCCEEEEEHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEC
KSGRTSLFALDDKGEALAALRIVVTQPIEELRAMLMDQVGDSSIQVSYTPRGAILSGTAP
CCCCEEEEEECCCCCEEEEEEEEHHCCHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCC
NAEVADTAKRVTEQYLGDGAQVVNNIKVAGSLQVNLSVRVAEVSRSAMKALGVNLSAFGQ
CCHHHHHHHHHHHHHHCCCHHHHHCEEEEEEEEEEEEEEEEHHHHHHHHHHCCCHHHCCC
IDNFRVGLLSGGGTGSGAAQGGGTAGIGFNNGAVNIGAVLDALAKEHIASVLAEPNLTAM
CCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEE
SGETASFLAGGEFPIPVLQENKQVSVEFRHFGVSLEFVPTVLNNNRINIHVKPEVSELSS
CCCCCEEEECCCCCCCCCCCCCEEEEEEEEECEEEEEEEHEECCCEEEEEECCCHHHHCC
QGAVQINGISVPAVSTRRADTVVELASGQSFAIGGLIRRNVNNNVSAFPWLGEMPILGAL
CCCEEECCEECCCCCCCCCCEEEEECCCCEEEECHHEEECCCCCCEECCCCCCCHHHHHH
FRSSSFQKEESELIILVTPYIVKPGSSPNQMSAPTDRMAPALDDPPADPPRGRAAARTGA
HHCCCCCCCCCCEEEEEECEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
PGAKRGRGFIIQ
CCCCCCCCEEEC
>Mature Secondary Structure
MQDQGAPRAASNSIDGTLNLSSSLGKTVHLPAPATTIFVADPTIADYQAASNTTIFVFGK
CCCCCCCCCCCCCCCEEEEEHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEC
KSGRTSLFALDDKGEALAALRIVVTQPIEELRAMLMDQVGDSSIQVSYTPRGAILSGTAP
CCCCEEEEEECCCCCEEEEEEEEHHCCHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCC
NAEVADTAKRVTEQYLGDGAQVVNNIKVAGSLQVNLSVRVAEVSRSAMKALGVNLSAFGQ
CCHHHHHHHHHHHHHHCCCHHHHHCEEEEEEEEEEEEEEEEHHHHHHHHHHCCCHHHCCC
IDNFRVGLLSGGGTGSGAAQGGGTAGIGFNNGAVNIGAVLDALAKEHIASVLAEPNLTAM
CCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEE
SGETASFLAGGEFPIPVLQENKQVSVEFRHFGVSLEFVPTVLNNNRINIHVKPEVSELSS
CCCCCEEEECCCCCCCCCCCCCEEEEEEEEECEEEEEEEHEECCCEEEEEECCCHHHHCC
QGAVQINGISVPAVSTRRADTVVELASGQSFAIGGLIRRNVNNNVSAFPWLGEMPILGAL
CCCEEECCEECCCCCCCCCCEEEEECCCCEEEECHHEEECCCCCCEECCCCCCCHHHHHH
FRSSSFQKEESELIILVTPYIVKPGSSPNQMSAPTDRMAPALDDPPADPPRGRAAARTGA
HHCCCCCCCCCCEEEEEECEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
PGAKRGRGFIIQ
CCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]